National Institute Of Genetic Engineering and Biotechnology

P.I:Mohammad-Ali Malboobi
Here we provide last mutation observed in Nucleocapsid gene of COVID-19 prevalent in Iran.
We kindly wait your comment or coopration in tracking crona virus project.

Amino acid changes

How to read this table:
- Rows are reference amino acids and columns are changed amino acids. E.g. Row 'A' column 'E' indicates how many 'A' amino acids have been replaced by 'E' amino acids.
- Red background colors indicate that more changes happened (heat-map).
- Diagonals are indicated using grey background color
- WARNING: This table may include different translation codon tables (e.g. mamalian DNA and mitochondrial DNA).

  * - ? A C D E F G H I K L M N P Q R S T V W Y
*                                              
-     540                                        
?                                              
A     21 1                               2 2    
C     3                                        
D     27 1   1     2                            
E     54     1 2                           2    
F     15                   2                    
G     66   1       2                            
H     21             1             1           1
I     9                                   1    
K     27                                        
L     63         1         6                    
M     9                                        
N     18     1                 3       1        
P     24                         2     1        
Q     21                                        
R     30   2                         1          
S     30   1                           3 1      
T     21               4                        
V     63 2       1         1 1             8    
W     3                                        
Y 1   15                                       1

Nucleotide and amino acid mutations

Here we provide list of mutation observed in Nucleocapsid at gene and protein of COVID-19.
-The position column is nucleotide position in reference genome as NC_045512.2
-The Reference column indicate reference nucleotide in NC_045512.2
-The NS column indicate number of samples that this position have been observed
-The NSR column indicate number of samples with reference nucleotide. Therefore diffrenciate related to Ns indicate number of sample with mutated nucleotide

Contoury Position Reference Alt. NSR NS AAchange
0 Germany 266 A 1984 1984
1 Germany 267 T 1984 1984
2 Germany 268 G 1984 1984
3 Germany 269 G 1985 1985
4 Germany 270 A 1985 1985
5 Germany 271 G 1985 1985
6 Germany 272 A 1985 1985
7 Germany 273 G 1985 1985
8 Germany 274 C T 1985 1984 Ser3Ser
9 Germany 275 C 1985 1985
10 Germany 276 T 1985 1985
11 Germany 277 T 1985 1985
12 Germany 278 G 1985 1985
13 Germany 279 T 1985 1985
14 Germany 280 C T 1985 1984 Val5Val
15 Germany 281 C T 1985 1984 Pro6Ser
16 Germany 282 C 1985 1985
17 Germany 283 T 1985 1985
18 Germany 284 G 1985 1985
19 Germany 285 G 1985 1985
20 Germany 286 T 1985 1985
21 Germany 287 T 1985 1985
22 Germany 288 T 1985 1985
23 Germany 289 C A 1985 1984 Phe8Leu
24 Germany 290 A 1985 1985
25 Germany 291 A 1985 1985
26 Germany 292 C T 1985 1983 Asn9Asn
27 Germany 293 G 1985 1985
28 Germany 294 A 1985 1985
29 Germany 295 G 1985 1985
30 Germany 296 A 1985 1985
31 Germany 297 A 1985 1985
32 Germany 298 A 1985 1985
33 Germany 299 A 1985 1985
34 Germany 300 C T 1985 1984 Thr12Ile
35 Germany 301 A 1985 1985
36 Germany 302 C 1985 1985
37 Germany 303 A 1985 1985
38 Germany 304 C 1985 1985
39 Germany 305 G 1985 1985
40 Germany 306 T 1985 1985
41 Germany 307 C 1985 1985
42 Germany 308 C 1985 1985
43 Germany 309 A 1985 1985
44 Germany 310 A 1985 1985
45 Germany 311 C 1985 1985
46 Germany 312 T 1985 1985
47 Germany 313 C T 1985 1934 Leu16Leu
48 Germany 314 A T 1985 1984 Ser17Cys
49 Germany 315 G 1985 1985
50 Germany 316 T 1985 1985
51 Germany 317 T 1985 1985
52 Germany 318 T 1985 1985
53 Germany 319 G 1985 1985
54 Germany 320 C 1986 1986
55 Germany 321 C 1989 1989
56 Germany 322 T 1989 1989
57 Germany 323 G 1989 1989
58 Germany 324 T 1989 1989
59 Germany 325 T 1989 1989
60 Germany 326 T 1989 1989
61 Germany 327 T 1989 1989
62 Germany 328 A 1989 1989
63 Germany 329 C 1989 1989
64 Germany 330 A 1989 1989
65 Germany 331 G 1990 1990
66 Germany 332 G T 1990 1988 Val23Phe
67 Germany 333 T 1990 1990
68 Germany 334 T 1990 1990
69 Germany 335 C T 1990 1986 Arg24Cys
70 Germany 336 G 1990 1990
71 Germany 337 C T 1990 1988 Arg24Arg
72 Germany 338 G 1990 1990
73 Germany 339 A 1990 1990
74 Germany 340 C 1990 1990
75 Germany 341 G 1990 1990
76 Germany 342 T 1990 1990
77 Germany 343 G 1991 1991
78 Germany 344 C T 1992 1990 Leu27Phe
79 Germany 345 T 1992 1991
80 Germany 346 C T 1992 1990 Leu27Leu
81 Germany 347 G 1992 1991
82 Germany 348 T 1992 1991
83 Germany 349 A 1992 1991
84 Germany 350 C 1992 1991
85 Germany 351 G 1992 1991
86 Germany 352 T 1992 1991
87 Germany 353 G 1993 1992
88 Germany 354 G 1993 1992
89 Germany 355 C 1993 1992
90 Germany 356 T 1993 1993
91 Germany 357 T 1993 1993
92 Germany 358 T 1993 1993
93 Germany 359 G 1993 1993
94 Germany 360 G 1993 1993
95 Germany 361 A 1993 1993
96 Germany 362 G 1993 1993
97 Germany 363 A G 1993 1992 Asp33Gly
98 Germany 364 C 1993 1993
99 Germany 365 T A 1993 1992 Ser34Thr
100 Germany 366 C 1993 1993
101 Germany 367 C T 1993 1992 Ser34Ser
102 Germany 368 G 1993 1993
103 Germany 369 T 1993 1993
104 Germany 370 G T 1993 1990 Val35Val
105 Germany 371 G 1993 1993
106 Germany 372 A 1993 1992
107 Germany 373 G 1993 1992
108 Germany 374 G 1993 1992
109 Germany 375 A 1993 1992
110 Germany 376 G T 1993 1991 Glu37Asp
111 Germany 377 G 1993 1993
112 Germany 378 T C 1993 1992 Val38Ala
113 Germany 379 C T 1993 1991 Val38Val
114 Germany 380 T 1993 1993
115 Germany 381 T 1993 1992
116 Germany 382 A 1993 1992
117 Germany 383 T 1993 1992
118 Germany 384 C 1993 1992
119 Germany 385 A 1993 1992
120 Germany 386 G 1993 1992
121 Germany 387 A 1993 1992
122 Germany 388 G 1993 1992
123 Germany 389 G 1993 1992
124 Germany 390 C 1993 1991
125 Germany 391 A 1993 1991
126 Germany 392 C 1993 1992
127 Germany 393 G 1993 1992
128 Germany 394 T 1993 1992
129 Germany 395 C 1993 1992
130 Germany 396 A 1993 1992
131 Germany 397 A 1993 1992
132 Germany 398 C 1993 1992
133 Germany 399 A 1993 1992
134 Germany 400 T 1993 1992
135 Germany 401 C 1993 1992
136 Germany 402 T 1993 1992
137 Germany 403 T 1993 1992
138 Germany 404 A 1993 1992
139 Germany 405 A 1993 1992
140 Germany 406 A 1993 1992
141 Germany 407 G 1993 1992
142 Germany 408 A G 1993 1987 Asp48Gly
143 Germany 409 T 1993 1992
144 Germany 410 G 1993 1992
145 Germany 411 G 1993 1992
146 Germany 412 C 1993 1992
147 Germany 413 A 1993 1992
148 Germany 414 C 1993 1992
149 Germany 415 T 1993 1992
150 Germany 416 T 1993 1992
151 Germany 417 G 1993 1992
152 Germany 418 T 1993 1992
153 Germany 419 G 1993 1992
154 Germany 420 G 1993 1992
155 Germany 421 C 1993 1992
156 Germany 422 T 1993 1992
157 Germany 423 T 1993 1992
158 Germany 424 A 1993 1992
159 Germany 425 G 1993 1992
160 Germany 426 T 1993 1992
161 Germany 427 A 1993 1992
162 Germany 428 G 1993 1992
163 Germany 429 A 1993 1992
164 Germany 430 A 1993 1992
165 Germany 431 G 1993 1992
166 Germany 432 T 1993 1992
167 Germany 433 T 1993 1992
168 Germany 434 G 1994 1989
169 Germany 435 A 1994 1989
170 Germany 436 A 1994 1994
171 Germany 437 A 1994 1994
172 Germany 438 A 1994 1994
173 Germany 439 A 1994 1994
174 Germany 440 G 1994 1994
175 Germany 441 G 1994 1994
176 Germany 442 C 1994 1994
177 Germany 443 G 1994 1994
178 Germany 444 T 1994 1994
179 Germany 445 T C 1994 1801 Val60Val
180 Germany 446 T 1994 1994
181 Germany 447 T 1994 1994
182 Germany 448 G 1994 1994
183 Germany 449 C 1994 1994
184 Germany 450 C 1994 1994
185 Germany 451 T 1994 1994
186 Germany 452 C 1994 1994
187 Germany 453 A 1994 1994
188 Germany 454 A 1994 1994
189 Germany 455 C 1994 1994
190 Germany 456 T 1994 1994
191 Germany 457 T 1994 1994
192 Germany 458 G 1994 1994
193 Germany 459 A 1994 1994
194 Germany 460 A 1994 1994
195 Germany 461 C 1994 1994
196 Germany 462 A 1994 1994
197 Germany 463 G 1994 1994
198 Germany 464 C 1994 1994
199 Germany 465 C 1994 1994
200 Germany 466 C T 1994 1991 Pro67Pro
201 Germany 467 T 1994 1994
202 Germany 468 A 1994 1994
203 Germany 469 T C 1994 1993 Tyr68Tyr
204 Germany 470 G 1994 1994
205 Germany 471 T 1994 1994
206 Germany 472 G 1994 1994
207 Germany 473 T 1994 1994
208 Germany 474 T 1994 1994
209 Germany 475 C A 1994 1993 Phe70Leu
210 Germany 476 A 1994 1994
211 Germany 477 T 1994 1994
212 Germany 478 C 1994 1994
213 Germany 479 A 1994 1994
214 Germany 480 A 1994 1994
215 Germany 481 A 1994 1994
216 Germany 482 C 1994 1994
217 Germany 483 G 1994 1994
218 Germany 484 T 1994 1994
219 Germany 485 T 1994 1994
220 Germany 486 C 1994 1994
221 Germany 487 G A 1994 1993 Ser74Ser
222 Germany 488 G 1994 1994
223 Germany 489 A 1994 1994
224 Germany 490 T 1994 1994
225 Germany 491 G 1994 1994
226 Germany 492 C 1994 1994
227 Germany 493 T 1994 1994
228 Germany 494 C 1994 1994
229 Germany 495 G 1994 1994
230 Germany 496 A 1994 1994
231 Germany 497 A 1994 1994
232 Germany 498 C T 1994 1993 Thr78Ile
233 Germany 499 T 1994 1994
234 Germany 500 G 1994 1994
235 Germany 501 C 1994 1994
236 Germany 502 A 1994 1994
237 Germany 503 C 1994 1994
238 Germany 504 C 1994 1994
239 Germany 505 T 1990 1990
240 Germany 506 C 1990 1990
241 Germany 507 A 1990 1990
242 Germany 508 T A 1990 1989 His81Gln
243 Germany 509 G 1990 1990
244 Germany 510 G 1990 1989
245 Germany 511 T 1990 1990
246 Germany 512 C 1990 1990
247 Germany 513 A 1990 1990
248 Germany 514 T C 1990 1986 His83His
249 Germany 515 G 1990 1990
250 Germany 516 T 1990 1990
251 Germany 517 T C 1990 1989 Val84Val
252 Germany 518 A 1990 1987
253 Germany 519 T 1990 1987
254 Germany 520 G 1990 1987
255 Germany 521 G 1990 1987
256 Germany 522 T 1990 1987
257 Germany 523 T 1990 1987
258 Germany 524 G 1990 1987
259 Germany 525 A 1990 1990
260 Germany 526 G 1990 1990
261 Germany 527 C T 1990 1988 Leu88Leu
262 Germany 528 T 1990 1990
263 Germany 529 G T 1990 1987 Leu88Leu
264 Germany 530 G 1990 1990
265 Germany 531 T 1990 1990
266 Germany 532 A 1990 1990
267 Germany 533 G 1990 1990
268 Germany 534 C 1990 1990
269 Germany 535 A 1990 1989
270 Germany 536 G 1990 1989
271 Germany 537 A 1990 1989
272 Germany 538 A 1990 1989
273 Germany 539 C 1990 1989
274 Germany 540 T 1990 1989
275 Germany 541 C T 1990 1984 Leu92Leu
276 Germany 542 G 1990 1989
277 Germany 543 A 1990 1989
278 Germany 544 A 1990 1989
279 Germany 545 G 1990 1988
280 Germany 546 G 1990 1989
281 Germany 547 C 1990 1989
282 Germany 548 A 1990 1989
283 Germany 549 T 1990 1989
284 Germany 550 T 1990 1989
285 Germany 551 C 1990 1989
286 Germany 552 A 1990 1989
287 Germany 553 G 1990 1989
288 Germany 554 T 1990 1989
289 Germany 555 A 1990 1989
290 Germany 556 C G 1990 1988 Tyr97*
291 Germany 557 G 1990 1989
292 Germany 558 G 1990 1987
293 Germany 559 T 1990 1989
294 Germany 560 C 1990 1989
295 Germany 561 G 1990 1989
296 Germany 562 T 1990 1989
297 Germany 563 A 1990 1989
298 Germany 564 G 1990 1988
299 Germany 565 T 1994 1992
300 Germany 566 G 1994 1993
301 Germany 567 G 1994 1993
302 Germany 568 T 1994 1993
303 Germany 569 G 1994 1993
304 Germany 570 A 1994 1994
305 Germany 571 G A 1994 1990 Glu102Glu
306 Germany 572 A 1994 1993
307 Germany 573 C 1994 1993
308 Germany 574 A 1994 1993
309 Germany 575 C 1994 1993
310 Germany 576 T 1994 1993
311 Germany 577 T 1994 1993
312 Germany 578 G 1994 1993
313 Germany 579 G 1994 1993
314 Germany 580 T 1994 1993
315 Germany 581 G 1995 1994
316 Germany 582 T 1995 1994
317 Germany 583 C 1995 1994
318 Germany 584 C 1995 1994
319 Germany 585 T 1995 1994
320 Germany 586 T 1995 1994
321 Germany 587 G 1995 1994
322 Germany 588 T 1995 1994
323 Germany 589 C T 1995 1993 Val108Val
324 Germany 590 C 1995 1994
325 Germany 591 C 1995 1994
326 Germany 592 T 1995 1994
327 Germany 593 C T 1995 1981 His110Tyr
328 Germany 594 A 1995 1994
329 Germany 595 T 1995 1994
330 Germany 596 G T 1995 1993 Val111Leu
331 Germany 597 T 1995 1994
332 Germany 598 G 1995 1994
333 Germany 599 G 1995 1994
334 Germany 600 G 1995 1994
335 Germany 601 C 1995 1994
336 Germany 602 G 1995 1994
337 Germany 603 A 1995 1994
338 Germany 604 A G 1995 1991 Glu113Glu
339 Germany 605 A G 1995 1994 Ile114Val
340 Germany 606 T 1995 1995
341 Germany 607 A 1995 1995
342 Germany 608 C 1995 1995
343 Germany 609 C 1995 1995
344 Germany 610 A G 1995 1994 Pro115Pro
345 Germany 611 G A 1995 1993 Val116Met
346 Germany 612 T 1995 1995
347 Germany 613 G 1995 1995
348 Germany 614 G 1995 1995
349 Germany 615 C T 1995 1994 Ala117Val
350 Germany 616 T 1995 1995
351 Germany 617 T 1995 1995
352 Germany 618 A 1995 1995
353 Germany 619 C 1995 1995
354 Germany 620 C 1995 1995
355 Germany 621 G 1995 1995
356 Germany 622 C 1995 1995
357 Germany 623 A 1995 1995
358 Germany 624 A 1995 1995
359 Germany 625 G 1995 1995
360 Germany 626 G 1995 1995
361 Germany 627 T 1995 1995
362 Germany 628 T C 1995 1994 Val121Val
363 Germany 629 C 1995 1995
364 Germany 630 T 1995 1995
365 Germany 631 T 1995 1995
366 Germany 632 C 1995 1995
367 Germany 633 T 1995 1995
368 Germany 634 T 1995 1995
369 Germany 635 C T 1995 1993 Arg124Cys
370 Germany 636 G 1995 1995
371 Germany 637 T 1995 1995
372 Germany 638 A 1995 1995
373 Germany 639 A 1995 1995
374 Germany 640 G 1995 1995
375 Germany 641 A 1995 1995
376 Germany 642 A G 1995 1987 Asn126Ser
377 Germany 643 C T 1995 1990 Asn126Asn
378 Germany 644 G 1995 1995
379 Germany 645 G 1995 1995
380 Germany 646 T 1995 1995
381 Germany 647 A 1995 1995
382 Germany 648 A 1995 1995
383 Germany 649 T 1995 1995
384 Germany 650 A 1995 1995
385 Germany 651 A 1995 1995
386 Germany 652 A 1995 1995
387 Germany 653 G 1995 1995
388 Germany 654 G 1995 1994
389 Germany 655 A 1995 1994
390 Germany 656 G A 1995 1992 Ala131Thr
391 Germany 657 C T 1995 1992 Ala131Val
392 Germany 658 T C 1995 1983 Ala131Ala
393 Germany 659 G 1995 1993
394 Germany 660 G 1995 1993
395 Germany 661 T 1995 1993
396 Germany 662 G 1995 1992
397 Germany 663 G 1995 1991
398 Germany 664 C T 1995 1989 Gly133Gly
399 Germany 665 C 1995 1990
400 Germany 666 A 1995 1990
401 Germany 667 T 1995 1990
402 Germany 668 A 1995 1990
403 Germany 669 G 1995 1991
404 Germany 670 T 1995 1991
405 Germany 671 T 1995 1994
406 Germany 672 A 1995 1995
407 Germany 673 C 1995 1995
408 Germany 674 G 1995 1995
409 Germany 675 G 1995 1994
410 Germany 676 C T 1995 1994 Gly137Gly
411 Germany 677 G A 1995 1984 Ala138Thr
412 Germany 678 C 1995 1995
413 Germany 679 C 1995 1995
414 Germany 680 G 1995 1995
415 Germany 681 A 1995 1995
416 Germany 682 T C 1995 1993 Asp139Asp
417 Germany 683 C T 1995 1992 Leu140Leu
418 Germany 684 T 1995 1995
419 Germany 685 A 1995 1995
420 Germany 686 A 1985 1982
421 Germany 687 A 1985 1982
422 Germany 688 G 1985 1982
423 Germany 689 T 1985 1983
424 Germany 690 C 1985 1983
425 Germany 691 A 1985 1983
426 Germany 692 T 1985 1982
427 Germany 693 T 1985 1983
428 Germany 694 T 1985 1983
429 Germany 695 G 1985 1985
430 Germany 696 A C 1985 1984 Asp144Ala
431 Germany 697 C 1985 1985
432 Germany 698 T 1985 1985
433 Germany 699 T 1985 1985
434 Germany 700 A 1985 1985
435 Germany 701 G T 1985 1983 Gly146Cys
436 Germany 702 G 1985 1985
437 Germany 703 C 1985 1985
438 Germany 704 G 1985 1985
439 Germany 705 A 1985 1985
440 Germany 706 C 1985 1985
441 Germany 707 G 1985 1985
442 Germany 708 A 1985 1985
443 Germany 709 G 1985 1985
444 Germany 710 C 1985 1985
445 Germany 711 T 1985 1985
446 Germany 712 T 1985 1985
447 Germany 713 G 1985 1985
448 Germany 714 G 1985 1985
449 Germany 715 C 1985 1985
450 Germany 716 A 1985 1985
451 Germany 717 C 1985 1985
452 Germany 718 T 1985 1985
453 Germany 719 G 1985 1985
454 Germany 720 A 1985 1985
455 Germany 721 T 1985 1985
456 Germany 722 C 1985 1985
457 Germany 723 C 1985 1985
458 Germany 724 T 1985 1985
459 Germany 725 T 1985 1985
460 Germany 726 A 1985 1985
461 Germany 727 T 1985 1985
462 Germany 728 G 1985 1985
463 Germany 729 A T 1985 1984 Glu155Val
464 Germany 730 A 1985 1985
465 Germany 731 G 1985 1985
466 Germany 732 A 1985 1985
467 Germany 733 T 1985 1985
468 Germany 734 T 1985 1985
469 Germany 735 T 1985 1985
470 Germany 736 T 1985 1985
471 Germany 737 C 1985 1985
472 Germany 738 A 1985 1985
473 Germany 739 A 1985 1985
474 Germany 740 G 1985 1985
475 Germany 741 A 1985 1985
476 Germany 742 A 1985 1985
477 Germany 743 A 1985 1985
478 Germany 744 A 1985 1985
479 Germany 745 C T 1985 1982 Asn160Asn
480 Germany 746 T 1995 1995
481 Germany 747 G 1995 1995
482 Germany 748 G 1995 1995
483 Germany 749 A G 1995 1993 Asn162Asp
484 Germany 750 A 1995 1994
485 Germany 751 C 1995 1994
486 Germany 752 A 1995 1993
487 Germany 753 C T 1995 1992 Thr163Ile
488 Germany 754 T 1995 1993
489 Germany 755 A 1995 1995
490 Germany 756 A 1995 1995
491 Germany 757 A 1995 1995
492 Germany 758 C 1995 1995
493 Germany 759 A 1995 1994
494 Germany 760 T 1995 1994
495 Germany 761 A 1995 1995
496 Germany 762 G 1995 1995
497 Germany 763 C 1995 1995
498 Germany 764 A 1995 1995
499 Germany 765 G 1995 1995
500 Germany 766 T 1995 1995
501 Germany 767 G 1995 1995
502 Germany 768 G 1995 1995
503 Germany 769 T 1995 1995
504 Germany 770 G 1995 1995
505 Germany 771 T C 1995 1994 Val169Ala
506 Germany 772 T C 1995 1971 Val169Val
507 Germany 773 A 1995 1995
508 Germany 774 C T 1995 1994 Thr170Ile
509 Germany 775 C 1995 1995
510 Germany 776 C 1995 1995
511 Germany 777 G 1995 1995
512 Germany 778 T 1995 1995
513 Germany 779 G 1995 1995
514 Germany 780 A 1994 1994
515 Germany 781 A 1994 1994
516 Germany 782 C 1994 1994
517 Germany 783 T 1994 1994
518 Germany 784 C 1994 1994
519 Germany 785 A 1994 1994
520 Germany 786 T 1994 1994
521 Germany 787 G 1994 1994
522 Germany 788 C 1994 1994
523 Germany 789 G 1994 1994
524 Germany 790 T 1994 1994
525 Germany 791 G 1994 1994
526 Germany 792 A T 1994 1993 Glu176Val
527 Germany 793 G 1994 1994
528 Germany 794 C 1994 1994
529 Germany 795 T 1994 1994
530 Germany 796 T 1994 1994
531 Germany 797 A 1994 1994
532 Germany 798 A 1994 1994
533 Germany 799 C 1994 1994
534 Germany 800 G 1994 1994
535 Germany 801 G 1994 1994
536 Germany 802 A 1994 1994
537 Germany 803 G 1994 1994
538 Germany 804 G 1994 1994
539 Germany 805 G 1987 1987