National Institute Of Genetic Engineering and Biotechnology

P.I:Mohammad-Ali Malboobi
Here we provide last mutation observed in Nucleocapsid gene of COVID-19 prevalent in Iran.
We kindly wait your comment or coopration in tracking crona virus project.

Amino acid changes

How to read this table:
- Rows are reference amino acids and columns are changed amino acids. E.g. Row 'A' column 'E' indicates how many 'A' amino acids have been replaced by 'E' amino acids.
- Red background colors indicate that more changes happened (heat-map).
- Diagonals are indicated using grey background color
- WARNING: This table may include different translation codon tables (e.g. mamalian DNA and mitochondrial DNA).

  - ? A C D E F G H I K L M N P Q R S T V W Y
-   540                                        
?                                            
A   21                                        
C   3                                        
D   27                                        
E   54                                        
F   15                                        
G   66                                        
H   21                                        
I   9                                        
K   27                                        
L   63                                        
M   9                                        
N   18                                        
P   24                                        
Q   21                                        
R   30                                        
S   30                                        
T   21                                        
V   63                                        
W   3                                        
Y   15                                        

Nucleotide and amino acid mutations

Here we provide list of mutation observed in Nucleocapsid at gene and protein of COVID-19.
-The position column is nucleotide position in reference genome as NC_045512.2
-The Reference column indicate reference nucleotide in NC_045512.2
-The NS column indicate number of samples that this position have been observed
-The NSR column indicate number of samples with reference nucleotide. Therefore diffrenciate related to Ns indicate number of sample with mutated nucleotide

Contoury Position Reference Alt. NSR NS AAchange
0 Cyprus 266 A 8 8
1 Cyprus 267 T 8 8
2 Cyprus 268 G 8 8
3 Cyprus 269 G 8 8
4 Cyprus 270 A 8 8
5 Cyprus 271 G 8 8
6 Cyprus 272 A 8 8
7 Cyprus 273 G 8 8
8 Cyprus 274 C 8 8
9 Cyprus 275 C 8 8
10 Cyprus 276 T 8 8
11 Cyprus 277 T 8 8
12 Cyprus 278 G 8 8
13 Cyprus 279 T 8 8
14 Cyprus 280 C 8 8
15 Cyprus 281 C 8 8
16 Cyprus 282 C 8 8
17 Cyprus 283 T 8 8
18 Cyprus 284 G 8 8
19 Cyprus 285 G 8 8
20 Cyprus 286 T 8 8
21 Cyprus 287 T 8 8
22 Cyprus 288 T 8 8
23 Cyprus 289 C 8 8
24 Cyprus 290 A 8 8
25 Cyprus 291 A 8 8
26 Cyprus 292 C 8 8
27 Cyprus 293 G 8 8
28 Cyprus 294 A 8 8
29 Cyprus 295 G 8 8
30 Cyprus 296 A 8 8
31 Cyprus 297 A 8 8
32 Cyprus 298 A 8 8
33 Cyprus 299 A 8 8
34 Cyprus 300 C 8 8
35 Cyprus 301 A 8 8
36 Cyprus 302 C 8 8
37 Cyprus 303 A 8 8
38 Cyprus 304 C 8 8
39 Cyprus 305 G 8 8
40 Cyprus 306 T 8 8
41 Cyprus 307 C 8 8
42 Cyprus 308 C 8 8
43 Cyprus 309 A 8 8
44 Cyprus 310 A 8 8
45 Cyprus 311 C 8 8
46 Cyprus 312 T 8 8
47 Cyprus 313 C 8 8
48 Cyprus 314 A 8 8
49 Cyprus 315 G 8 8
50 Cyprus 316 T 8 8
51 Cyprus 317 T 8 8
52 Cyprus 318 T 8 8
53 Cyprus 319 G 8 8
54 Cyprus 320 C 8 8
55 Cyprus 321 C 8 8
56 Cyprus 322 T 8 8
57 Cyprus 323 G 8 8
58 Cyprus 324 T 8 8
59 Cyprus 325 T 8 8
60 Cyprus 326 T 8 8
61 Cyprus 327 T 8 8
62 Cyprus 328 A 8 8
63 Cyprus 329 C 8 8
64 Cyprus 330 A 8 8
65 Cyprus 331 G 8 8
66 Cyprus 332 G 8 8
67 Cyprus 333 T 8 8
68 Cyprus 334 T 8 8
69 Cyprus 335 C 8 8
70 Cyprus 336 G 8 8
71 Cyprus 337 C 8 8
72 Cyprus 338 G 8 8
73 Cyprus 339 A 8 8
74 Cyprus 340 C 8 8
75 Cyprus 341 G 8 8
76 Cyprus 342 T 8 8
77 Cyprus 343 G 8 8
78 Cyprus 344 C 8 8
79 Cyprus 345 T 8 8
80 Cyprus 346 C 8 8
81 Cyprus 347 G 8 8
82 Cyprus 348 T 8 8
83 Cyprus 349 A 8 8
84 Cyprus 350 C 8 8
85 Cyprus 351 G 8 8
86 Cyprus 352 T 8 8
87 Cyprus 353 G 8 8
88 Cyprus 354 G 8 8
89 Cyprus 355 C 8 8
90 Cyprus 356 T 8 8
91 Cyprus 357 T 8 8
92 Cyprus 358 T 8 8
93 Cyprus 359 G 8 8
94 Cyprus 360 G 8 8
95 Cyprus 361 A 8 8
96 Cyprus 362 G 8 8
97 Cyprus 363 A 8 8
98 Cyprus 364 C 8 8
99 Cyprus 365 T 8 8
100 Cyprus 366 C 8 8
101 Cyprus 367 C 8 8
102 Cyprus 368 G 8 8
103 Cyprus 369 T 8 8
104 Cyprus 370 G 8 8
105 Cyprus 371 G 8 8
106 Cyprus 372 A 8 8
107 Cyprus 373 G 8 8
108 Cyprus 374 G 8 8
109 Cyprus 375 A 8 8
110 Cyprus 376 G 8 8
111 Cyprus 377 G 8 8
112 Cyprus 378 T 8 8
113 Cyprus 379 C 8 8
114 Cyprus 380 T 8 8
115 Cyprus 381 T 8 8
116 Cyprus 382 A 8 8
117 Cyprus 383 T 8 8
118 Cyprus 384 C 8 8
119 Cyprus 385 A 8 8
120 Cyprus 386 G 8 8
121 Cyprus 387 A 8 8
122 Cyprus 388 G 8 8
123 Cyprus 389 G 8 8
124 Cyprus 390 C 8 8
125 Cyprus 391 A 8 8
126 Cyprus 392 C 8 8
127 Cyprus 393 G 8 8
128 Cyprus 394 T 8 8
129 Cyprus 395 C 8 8
130 Cyprus 396 A 8 8
131 Cyprus 397 A 8 8
132 Cyprus 398 C 8 8
133 Cyprus 399 A 8 8
134 Cyprus 400 T 8 8
135 Cyprus 401 C 8 8
136 Cyprus 402 T 8 8
137 Cyprus 403 T 8 8
138 Cyprus 404 A 8 8
139 Cyprus 405 A 8 8
140 Cyprus 406 A 8 8
141 Cyprus 407 G 8 8
142 Cyprus 408 A 8 8
143 Cyprus 409 T 8 8
144 Cyprus 410 G 8 8
145 Cyprus 411 G 8 8
146 Cyprus 412 C 8 8
147 Cyprus 413 A 8 8
148 Cyprus 414 C 8 8
149 Cyprus 415 T 8 8
150 Cyprus 416 T 8 8
151 Cyprus 417 G 8 8
152 Cyprus 418 T 8 8
153 Cyprus 419 G 8 8
154 Cyprus 420 G 8 8
155 Cyprus 421 C 8 8
156 Cyprus 422 T 8 8
157 Cyprus 423 T 8 8
158 Cyprus 424 A 8 8
159 Cyprus 425 G 8 8
160 Cyprus 426 T 8 8
161 Cyprus 427 A 8 8
162 Cyprus 428 G 8 8
163 Cyprus 429 A 8 8
164 Cyprus 430 A 8 8
165 Cyprus 431 G 8 8
166 Cyprus 432 T 8 8
167 Cyprus 433 T 8 8
168 Cyprus 434 G 8 8
169 Cyprus 435 A 8 8
170 Cyprus 436 A 8 8
171 Cyprus 437 A 8 8
172 Cyprus 438 A 8 8
173 Cyprus 439 A 8 8
174 Cyprus 440 G 8 8
175 Cyprus 441 G 8 8
176 Cyprus 442 C 8 8
177 Cyprus 443 G 8 8
178 Cyprus 444 T 8 8
179 Cyprus 445 T 8 8
180 Cyprus 446 T 8 8
181 Cyprus 447 T 8 8
182 Cyprus 448 G 8 8
183 Cyprus 449 C 8 8
184 Cyprus 450 C 8 8
185 Cyprus 451 T 8 8
186 Cyprus 452 C 8 8
187 Cyprus 453 A 8 8
188 Cyprus 454 A 8 8
189 Cyprus 455 C 8 8
190 Cyprus 456 T 8 8
191 Cyprus 457 T 8 8
192 Cyprus 458 G 8 8
193 Cyprus 459 A 8 8
194 Cyprus 460 A 8 8
195 Cyprus 461 C 8 8
196 Cyprus 462 A 8 8
197 Cyprus 463 G 8 8
198 Cyprus 464 C 8 8
199 Cyprus 465 C 8 8
200 Cyprus 466 C 8 8
201 Cyprus 467 T 8 8
202 Cyprus 468 A 8 8
203 Cyprus 469 T 8 8
204 Cyprus 470 G 8 8
205 Cyprus 471 T 8 8
206 Cyprus 472 G 8 8
207 Cyprus 473 T 8 8
208 Cyprus 474 T 8 8
209 Cyprus 475 C 8 8
210 Cyprus 476 A 8 8
211 Cyprus 477 T 8 8
212 Cyprus 478 C 8 8
213 Cyprus 479 A 8 8
214 Cyprus 480 A 8 8
215 Cyprus 481 A 8 8
216 Cyprus 482 C 8 8
217 Cyprus 483 G 8 8
218 Cyprus 484 T 8 8
219 Cyprus 485 T 8 8
220 Cyprus 486 C 8 8
221 Cyprus 487 G 8 8
222 Cyprus 488 G 8 8
223 Cyprus 489 A 8 8
224 Cyprus 490 T 8 8
225 Cyprus 491 G 8 8
226 Cyprus 492 C 8 8
227 Cyprus 493 T 8 8
228 Cyprus 494 C 8 8
229 Cyprus 495 G 8 8
230 Cyprus 496 A 8 8
231 Cyprus 497 A 8 8
232 Cyprus 498 C 8 8
233 Cyprus 499 T 8 8
234 Cyprus 500 G 8 8
235 Cyprus 501 C 8 8
236 Cyprus 502 A 8 8
237 Cyprus 503 C 8 8
238 Cyprus 504 C 8 8
239 Cyprus 505 T 8 8
240 Cyprus 506 C 8 8
241 Cyprus 507 A 8 8
242 Cyprus 508 T 8 8
243 Cyprus 509 G 8 8
244 Cyprus 510 G 8 8
245 Cyprus 511 T 8 8
246 Cyprus 512 C 8 8
247 Cyprus 513 A 8 8
248 Cyprus 514 T 8 8
249 Cyprus 515 G 8 8
250 Cyprus 516 T 8 8
251 Cyprus 517 T 8 8
252 Cyprus 518 A 8 8
253 Cyprus 519 T 8 8
254 Cyprus 520 G 8 8
255 Cyprus 521 G 8 8
256 Cyprus 522 T 8 8
257 Cyprus 523 T 8 8
258 Cyprus 524 G 8 8
259 Cyprus 525 A 8 8
260 Cyprus 526 G 8 8
261 Cyprus 527 C 8 8
262 Cyprus 528 T 8 8
263 Cyprus 529 G 8 8
264 Cyprus 530 G 8 8
265 Cyprus 531 T 8 8
266 Cyprus 532 A 8 8
267 Cyprus 533 G 8 8
268 Cyprus 534 C 8 8
269 Cyprus 535 A 8 8
270 Cyprus 536 G 8 8
271 Cyprus 537 A 8 8
272 Cyprus 538 A 8 8
273 Cyprus 539 C 8 8
274 Cyprus 540 T 8 8
275 Cyprus 541 C 8 8
276 Cyprus 542 G 8 8
277 Cyprus 543 A 8 8
278 Cyprus 544 A 8 8
279 Cyprus 545 G 8 8
280 Cyprus 546 G 8 8
281 Cyprus 547 C 8 8
282 Cyprus 548 A 8 8
283 Cyprus 549 T 8 8
284 Cyprus 550 T 8 8
285 Cyprus 551 C 8 8
286 Cyprus 552 A 8 8
287 Cyprus 553 G 8 8
288 Cyprus 554 T 8 8
289 Cyprus 555 A 8 8
290 Cyprus 556 C 8 8
291 Cyprus 557 G 8 8
292 Cyprus 558 G 8 8
293 Cyprus 559 T 8 8
294 Cyprus 560 C 8 8
295 Cyprus 561 G 8 8
296 Cyprus 562 T 8 8
297 Cyprus 563 A 8 8
298 Cyprus 564 G 8 8
299 Cyprus 565 T 8 8
300 Cyprus 566 G 8 8
301 Cyprus 567 G 8 8
302 Cyprus 568 T 8 8
303 Cyprus 569 G 8 8
304 Cyprus 570 A 8 8
305 Cyprus 571 G 8 8
306 Cyprus 572 A 8 8
307 Cyprus 573 C 8 8
308 Cyprus 574 A 8 8
309 Cyprus 575 C 8 8
310 Cyprus 576 T 8 8
311 Cyprus 577 T 8 8
312 Cyprus 578 G 8 8
313 Cyprus 579 G 8 8
314 Cyprus 580 T 8 8
315 Cyprus 581 G 8 8
316 Cyprus 582 T 8 8
317 Cyprus 583 C 8 8
318 Cyprus 584 C 8 8
319 Cyprus 585 T 8 8
320 Cyprus 586 T 8 8
321 Cyprus 587 G 8 8
322 Cyprus 588 T 8 8
323 Cyprus 589 C 8 8
324 Cyprus 590 C 8 8
325 Cyprus 591 C 8 8
326 Cyprus 592 T 8 8
327 Cyprus 593 C 8 8
328 Cyprus 594 A 8 8
329 Cyprus 595 T 8 8
330 Cyprus 596 G 8 8
331 Cyprus 597 T 8 8
332 Cyprus 598 G 8 8
333 Cyprus 599 G 8 8
334 Cyprus 600 G 8 8
335 Cyprus 601 C 8 8
336 Cyprus 602 G 8 8
337 Cyprus 603 A 8 8
338 Cyprus 604 A 8 8
339 Cyprus 605 A 8 8
340 Cyprus 606 T 8 8
341 Cyprus 607 A 8 8
342 Cyprus 608 C 8 8
343 Cyprus 609 C 8 8
344 Cyprus 610 A 8 8
345 Cyprus 611 G 8 8
346 Cyprus 612 T 8 8
347 Cyprus 613 G 8 8
348 Cyprus 614 G 8 8
349 Cyprus 615 C 8 8
350 Cyprus 616 T 8 8
351 Cyprus 617 T 8 8
352 Cyprus 618 A 8 8
353 Cyprus 619 C 8 8
354 Cyprus 620 C 8 8
355 Cyprus 621 G 8 8
356 Cyprus 622 C 8 8
357 Cyprus 623 A 8 8
358 Cyprus 624 A 8 8
359 Cyprus 625 G 8 8
360 Cyprus 626 G 8 8
361 Cyprus 627 T 8 8
362 Cyprus 628 T 8 8
363 Cyprus 629 C 8 8
364 Cyprus 630 T 8 8
365 Cyprus 631 T 8 8
366 Cyprus 632 C 8 8
367 Cyprus 633 T 8 8
368 Cyprus 634 T 8 8
369 Cyprus 635 C 8 8
370 Cyprus 636 G 8 8
371 Cyprus 637 T 8 8
372 Cyprus 638 A 8 8
373 Cyprus 639 A 8 8
374 Cyprus 640 G 8 8
375 Cyprus 641 A 8 8
376 Cyprus 642 A 8 8
377 Cyprus 643 C 8 8
378 Cyprus 644 G 8 8
379 Cyprus 645 G 8 8
380 Cyprus 646 T 8 8
381 Cyprus 647 A 8 8
382 Cyprus 648 A 8 8
383 Cyprus 649 T 8 8
384 Cyprus 650 A 8 8
385 Cyprus 651 A 8 8
386 Cyprus 652 A 8 8
387 Cyprus 653 G 8 8
388 Cyprus 654 G 8 8
389 Cyprus 655 A 8 8
390 Cyprus 656 G 8 8
391 Cyprus 657 C 8 8
392 Cyprus 658 T 8 8
393 Cyprus 659 G 8 8
394 Cyprus 660 G 8 8
395 Cyprus 661 T 8 8
396 Cyprus 662 G 8 8
397 Cyprus 663 G 8 8
398 Cyprus 664 C 8 8
399 Cyprus 665 C 8 8
400 Cyprus 666 A 8 8
401 Cyprus 667 T 8 8
402 Cyprus 668 A 8 8
403 Cyprus 669 G 8 8
404 Cyprus 670 T 8 8
405 Cyprus 671 T 8 8
406 Cyprus 672 A 8 8
407 Cyprus 673 C 8 8
408 Cyprus 674 G 8 8
409 Cyprus 675 G 8 8
410 Cyprus 676 C 8 8
411 Cyprus 677 G 8 8
412 Cyprus 678 C 8 8
413 Cyprus 679 C 8 8
414 Cyprus 680 G 8 8
415 Cyprus 681 A 8 8
416 Cyprus 682 T 8 8
417 Cyprus 683 C 8 8
418 Cyprus 684 T 8 8
419 Cyprus 685 A 8 8
420 Cyprus 686 A 8 8
421 Cyprus 687 A 8 8
422 Cyprus 688 G 8 8
423 Cyprus 689 T 8 8
424 Cyprus 690 C 8 8
425 Cyprus 691 A 8 8
426 Cyprus 692 T 8 8
427 Cyprus 693 T 8 8
428 Cyprus 694 T 8 8
429 Cyprus 695 G 8 8
430 Cyprus 696 A 8 8
431 Cyprus 697 C 8 8
432 Cyprus 698 T 8 8
433 Cyprus 699 T 8 8
434 Cyprus 700 A 8 8
435 Cyprus 701 G 8 8
436 Cyprus 702 G 8 8
437 Cyprus 703 C 8 8
438 Cyprus 704 G 8 8
439 Cyprus 705 A 8 8
440 Cyprus 706 C 8 8
441 Cyprus 707 G 8 8
442 Cyprus 708 A 8 8
443 Cyprus 709 G 8 8
444 Cyprus 710 C 8 8
445 Cyprus 711 T 8 8
446 Cyprus 712 T 8 8
447 Cyprus 713 G 8 8
448 Cyprus 714 G 8 8
449 Cyprus 715 C 8 8
450 Cyprus 716 A 8 8
451 Cyprus 717 C 8 8
452 Cyprus 718 T 8 8
453 Cyprus 719 G 8 8
454 Cyprus 720 A 8 8
455 Cyprus 721 T 8 8
456 Cyprus 722 C 8 8
457 Cyprus 723 C 8 8
458 Cyprus 724 T 8 8
459 Cyprus 725 T 8 8
460 Cyprus 726 A 8 8
461 Cyprus 727 T 8 8
462 Cyprus 728 G 8 8
463 Cyprus 729 A 8 8
464 Cyprus 730 A 8 8
465 Cyprus 731 G 8 8
466 Cyprus 732 A 8 8
467 Cyprus 733 T 8 8
468 Cyprus 734 T 8 8
469 Cyprus 735 T 8 8
470 Cyprus 736 T 8 8
471 Cyprus 737 C 8 8
472 Cyprus 738 A 8 8
473 Cyprus 739 A 8 8
474 Cyprus 740 G 8 8
475 Cyprus 741 A 8 8
476 Cyprus 742 A 8 8
477 Cyprus 743 A 8 8
478 Cyprus 744 A 8 8
479 Cyprus 745 C 8 8
480 Cyprus 746 T 8 8
481 Cyprus 747 G 8 8
482 Cyprus 748 G 8 8
483 Cyprus 749 A 8 8
484 Cyprus 750 A 8 8
485 Cyprus 751 C 8 8
486 Cyprus 752 A 8 8
487 Cyprus 753 C 8 8
488 Cyprus 754 T 8 8
489 Cyprus 755 A 8 8
490 Cyprus 756 A 8 8
491 Cyprus 757 A 8 8
492 Cyprus 758 C 8 8
493 Cyprus 759 A 8 8
494 Cyprus 760 T 8 8
495 Cyprus 761 A 8 8
496 Cyprus 762 G 8 8
497 Cyprus 763 C 8 8
498 Cyprus 764 A 8 8
499 Cyprus 765 G 8 8
500 Cyprus 766 T 8 8
501 Cyprus 767 G 8 8
502 Cyprus 768 G 8 8
503 Cyprus 769 T 8 8
504 Cyprus 770 G 8 8
505 Cyprus 771 T 8 8
506 Cyprus 772 T 8 8
507 Cyprus 773 A 8 8
508 Cyprus 774 C 8 8
509 Cyprus 775 C 8 8
510 Cyprus 776 C 8 8
511 Cyprus 777 G 8 8
512 Cyprus 778 T 8 8
513 Cyprus 779 G 8 8
514 Cyprus 780 A 8 8
515 Cyprus 781 A 8 8
516 Cyprus 782 C 8 8
517 Cyprus 783 T 8 8
518 Cyprus 784 C 8 8
519 Cyprus 785 A 8 8
520 Cyprus 786 T 8 8
521 Cyprus 787 G 8 8
522 Cyprus 788 C 8 8
523 Cyprus 789 G 8 8
524 Cyprus 790 T 8 8
525 Cyprus 791 G 8 8
526 Cyprus 792 A 8 8
527 Cyprus 793 G 8 8
528 Cyprus 794 C 8 8
529 Cyprus 795 T 8 8
530 Cyprus 796 T 8 8
531 Cyprus 797 A 8 8
532 Cyprus 798 A 8 8
533 Cyprus 799 C 8 8
534 Cyprus 800 G 8 8
535 Cyprus 801 G 8 8
536 Cyprus 802 A 8 8
537 Cyprus 803 G 8 8
538 Cyprus 804 G 8 8
539 Cyprus 805 G 8 8