National Institute Of Genetic Engineering and Biotechnology

P.I:Mohammad-Ali Malboobi
Here we provide last mutation observed in Nucleocapsid gene of COVID-19 prevalent in Iran.
We kindly wait your comment or coopration in tracking crona virus project.

Amino acid changes

How to read this table:
- Rows are reference amino acids and columns are changed amino acids. E.g. Row 'A' column 'E' indicates how many 'A' amino acids have been replaced by 'E' amino acids.
- Red background colors indicate that more changes happened (heat-map).
- Diagonals are indicated using grey background color
- WARNING: This table may include different translation codon tables (e.g. mamalian DNA and mitochondrial DNA).

  - ? A C D E F G H I K L M N P Q R S T V W Y
-   540                                        
?                                            
A   21                                        
C   3                                        
D   27                                        
E   54           1                            
F   15                                        
G   66                                        
H   21                                       1
I   9                                        
K   27                                        
L   63                                        
M   9                                        
N   18                                        
P   24                                        
Q   21                                        
R   30                                        
S   30                                        
T   21                                        
V   63                                   1    
W   3                                        
Y   15                                        

Nucleotide and amino acid mutations

Here we provide list of mutation observed in Nucleocapsid at gene and protein of COVID-19.
-The position column is nucleotide position in reference genome as NC_045512.2
-The Reference column indicate reference nucleotide in NC_045512.2
-The NS column indicate number of samples that this position have been observed
-The NSR column indicate number of samples with reference nucleotide. Therefore diffrenciate related to Ns indicate number of sample with mutated nucleotide

Contoury Position Reference Alt. NSR NS AAchange
0 Cameroon 266 A 20 20
1 Cameroon 267 T 20 20
2 Cameroon 268 G 20 20
3 Cameroon 269 G 20 20
4 Cameroon 270 A 20 20
5 Cameroon 271 G 20 20
6 Cameroon 272 A 20 20
7 Cameroon 273 G 20 20
8 Cameroon 274 C 20 20
9 Cameroon 275 C 20 20
10 Cameroon 276 T 20 20
11 Cameroon 277 T 20 20
12 Cameroon 278 G 20 20
13 Cameroon 279 T 20 20
14 Cameroon 280 C 20 20
15 Cameroon 281 C 20 20
16 Cameroon 282 C 20 20
17 Cameroon 283 T 20 20
18 Cameroon 284 G 20 20
19 Cameroon 285 G 20 20
20 Cameroon 286 T 20 20
21 Cameroon 287 T 20 20
22 Cameroon 288 T 20 20
23 Cameroon 289 C 20 20
24 Cameroon 290 A 20 20
25 Cameroon 291 A 20 20
26 Cameroon 292 C 20 20
27 Cameroon 293 G 20 20
28 Cameroon 294 A 20 20
29 Cameroon 295 G 20 20
30 Cameroon 296 A 20 20
31 Cameroon 297 A 20 20
32 Cameroon 298 A 20 20
33 Cameroon 299 A 20 20
34 Cameroon 300 C 20 20
35 Cameroon 301 A 20 20
36 Cameroon 302 C 20 20
37 Cameroon 303 A 20 20
38 Cameroon 304 C 20 20
39 Cameroon 305 G 20 20
40 Cameroon 306 T 20 20
41 Cameroon 307 C 20 20
42 Cameroon 308 C 20 20
43 Cameroon 309 A 20 20
44 Cameroon 310 A 20 20
45 Cameroon 311 C 20 20
46 Cameroon 312 T 20 20
47 Cameroon 313 C 20 20
48 Cameroon 314 A 20 20
49 Cameroon 315 G 20 20
50 Cameroon 316 T 20 20
51 Cameroon 317 T 20 20
52 Cameroon 318 T 20 20
53 Cameroon 319 G 20 20
54 Cameroon 320 C 20 20
55 Cameroon 321 C 20 20
56 Cameroon 322 T 20 20
57 Cameroon 323 G 20 20
58 Cameroon 324 T 20 20
59 Cameroon 325 T 20 20
60 Cameroon 326 T 20 20
61 Cameroon 327 T 20 20
62 Cameroon 328 A 20 20
63 Cameroon 329 C 20 20
64 Cameroon 330 A 20 20
65 Cameroon 331 G 20 20
66 Cameroon 332 G 20 20
67 Cameroon 333 T 20 20
68 Cameroon 334 T 20 20
69 Cameroon 335 C 20 20
70 Cameroon 336 G 20 20
71 Cameroon 337 C 20 20
72 Cameroon 338 G 20 20
73 Cameroon 339 A 20 20
74 Cameroon 340 C 20 20
75 Cameroon 341 G 20 20
76 Cameroon 342 T 20 20
77 Cameroon 343 G 20 20
78 Cameroon 344 C 20 20
79 Cameroon 345 T 20 20
80 Cameroon 346 C 21 21
81 Cameroon 347 G 21 21
82 Cameroon 348 T 21 21
83 Cameroon 349 A 21 21
84 Cameroon 350 C 21 21
85 Cameroon 351 G 21 21
86 Cameroon 352 T 21 21
87 Cameroon 353 G 21 21
88 Cameroon 354 G 21 21
89 Cameroon 355 C 21 21
90 Cameroon 356 T 21 21
91 Cameroon 357 T 21 21
92 Cameroon 358 T 21 21
93 Cameroon 359 G 21 21
94 Cameroon 360 G 21 21
95 Cameroon 361 A 21 21
96 Cameroon 362 G 21 21
97 Cameroon 363 A 21 21
98 Cameroon 364 C 21 21
99 Cameroon 365 T 21 21
100 Cameroon 366 C 21 21
101 Cameroon 367 C 21 21
102 Cameroon 368 G 21 21
103 Cameroon 369 T 21 21
104 Cameroon 370 G 21 21
105 Cameroon 371 G 21 21
106 Cameroon 372 A 21 21
107 Cameroon 373 G 21 21
108 Cameroon 374 G 21 21
109 Cameroon 375 A 21 21
110 Cameroon 376 G 21 21
111 Cameroon 377 G 21 21
112 Cameroon 378 T 21 21
113 Cameroon 379 C 21 21
114 Cameroon 380 T 21 21
115 Cameroon 381 T 21 21
116 Cameroon 382 A 21 21
117 Cameroon 383 T 21 21
118 Cameroon 384 C 21 21
119 Cameroon 385 A 21 21
120 Cameroon 386 G 21 21
121 Cameroon 387 A 21 21
122 Cameroon 388 G 21 21
123 Cameroon 389 G 21 21
124 Cameroon 390 C 21 21
125 Cameroon 391 A 21 21
126 Cameroon 392 C 21 21
127 Cameroon 393 G 21 21
128 Cameroon 394 T 21 21
129 Cameroon 395 C 21 21
130 Cameroon 396 A 21 21
131 Cameroon 397 A 21 21
132 Cameroon 398 C 21 21
133 Cameroon 399 A 21 21
134 Cameroon 400 T 21 21
135 Cameroon 401 C 21 21
136 Cameroon 402 T 21 21
137 Cameroon 403 T 21 21
138 Cameroon 404 A 21 21
139 Cameroon 405 A 21 21
140 Cameroon 406 A 21 21
141 Cameroon 407 G 21 21
142 Cameroon 408 A 21 21
143 Cameroon 409 T 21 21
144 Cameroon 410 G 21 21
145 Cameroon 411 G 21 21
146 Cameroon 412 C 21 21
147 Cameroon 413 A 21 21
148 Cameroon 414 C 21 21
149 Cameroon 415 T 21 21
150 Cameroon 416 T 21 21
151 Cameroon 417 G 21 21
152 Cameroon 418 T 21 21
153 Cameroon 419 G 21 21
154 Cameroon 420 G 21 21
155 Cameroon 421 C 21 21
156 Cameroon 422 T 21 21
157 Cameroon 423 T 21 21
158 Cameroon 424 A 21 21
159 Cameroon 425 G 21 21
160 Cameroon 426 T 21 21
161 Cameroon 427 A 21 21
162 Cameroon 428 G 21 21
163 Cameroon 429 A 21 21
164 Cameroon 430 A 21 21
165 Cameroon 431 G 21 21
166 Cameroon 432 T 21 21
167 Cameroon 433 T 21 21
168 Cameroon 434 G 21 21
169 Cameroon 435 A 21 21
170 Cameroon 436 A 21 21
171 Cameroon 437 A 21 21
172 Cameroon 438 A 21 21
173 Cameroon 439 A 21 21
174 Cameroon 440 G 21 21
175 Cameroon 441 G 21 21
176 Cameroon 442 C 21 21
177 Cameroon 443 G 21 21
178 Cameroon 444 T 21 21
179 Cameroon 445 T C 21 19 Val60Val
180 Cameroon 446 T 21 21
181 Cameroon 447 T 21 21
182 Cameroon 448 G 21 21
183 Cameroon 449 C 21 21
184 Cameroon 450 C 21 21
185 Cameroon 451 T 21 21
186 Cameroon 452 C 21 21
187 Cameroon 453 A 21 21
188 Cameroon 454 A 21 21
189 Cameroon 455 C 21 21
190 Cameroon 456 T 21 21
191 Cameroon 457 T 21 21
192 Cameroon 458 G 21 21
193 Cameroon 459 A 21 21
194 Cameroon 460 A 21 21
195 Cameroon 461 C 21 21
196 Cameroon 462 A 21 21
197 Cameroon 463 G 21 21
198 Cameroon 464 C 21 21
199 Cameroon 465 C 21 21
200 Cameroon 466 C 21 21
201 Cameroon 467 T 21 21
202 Cameroon 468 A 21 21
203 Cameroon 469 T 21 21
204 Cameroon 470 G 21 21
205 Cameroon 471 T 21 21
206 Cameroon 472 G 21 21
207 Cameroon 473 T 21 21
208 Cameroon 474 T 21 21
209 Cameroon 475 C 21 21
210 Cameroon 476 A 21 21
211 Cameroon 477 T 21 21
212 Cameroon 478 C 21 21
213 Cameroon 479 A 21 21
214 Cameroon 480 A 21 21
215 Cameroon 481 A 21 20
216 Cameroon 482 C 21 20
217 Cameroon 483 G 21 20
218 Cameroon 484 T 21 20
219 Cameroon 485 T 21 20
220 Cameroon 486 C 21 20
221 Cameroon 487 G 21 20
222 Cameroon 488 G 21 20
223 Cameroon 489 A 21 20
224 Cameroon 490 T 21 20
225 Cameroon 491 G 21 20
226 Cameroon 492 C 21 20
227 Cameroon 493 T 21 20
228 Cameroon 494 C 21 20
229 Cameroon 495 G 21 21
230 Cameroon 496 A 21 21
231 Cameroon 497 A 21 21
232 Cameroon 498 C 21 21
233 Cameroon 499 T 21 21
234 Cameroon 500 G 21 21
235 Cameroon 501 C 21 21
236 Cameroon 502 A 21 21
237 Cameroon 503 C 21 21
238 Cameroon 504 C 21 21
239 Cameroon 505 T 21 21
240 Cameroon 506 C 21 21
241 Cameroon 507 A 21 21
242 Cameroon 508 T 21 21
243 Cameroon 509 G 21 21
244 Cameroon 510 G 21 21
245 Cameroon 511 T 21 21
246 Cameroon 512 C 21 21
247 Cameroon 513 A 21 21
248 Cameroon 514 T 21 21
249 Cameroon 515 G 21 21
250 Cameroon 516 T 21 21
251 Cameroon 517 T 21 21
252 Cameroon 518 A 21 21
253 Cameroon 519 T 21 21
254 Cameroon 520 G 21 21
255 Cameroon 521 G 21 21
256 Cameroon 522 T 21 21
257 Cameroon 523 T 21 21
258 Cameroon 524 G 21 21
259 Cameroon 525 A 21 21
260 Cameroon 526 G 21 21
261 Cameroon 527 C 21 21
262 Cameroon 528 T 21 21
263 Cameroon 529 G 21 21
264 Cameroon 530 G 21 21
265 Cameroon 531 T 21 21
266 Cameroon 532 A 21 21
267 Cameroon 533 G 21 21
268 Cameroon 534 C 21 21
269 Cameroon 535 A 21 21
270 Cameroon 536 G 21 21
271 Cameroon 537 A 21 21
272 Cameroon 538 A 21 21
273 Cameroon 539 C 21 21
274 Cameroon 540 T 21 21
275 Cameroon 541 C 21 21
276 Cameroon 542 G 21 21
277 Cameroon 543 A G 21 17 Glu93Gly
278 Cameroon 544 A 21 21
279 Cameroon 545 G 21 21
280 Cameroon 546 G 21 21
281 Cameroon 547 C 21 21
282 Cameroon 548 A 21 21
283 Cameroon 549 T 21 21
284 Cameroon 550 T 21 21
285 Cameroon 551 C 21 21
286 Cameroon 552 A 21 21
287 Cameroon 553 G 21 21
288 Cameroon 554 T 21 21
289 Cameroon 555 A 21 21
290 Cameroon 556 C 21 21
291 Cameroon 557 G 21 21
292 Cameroon 558 G 21 21
293 Cameroon 559 T 21 21
294 Cameroon 560 C 21 21
295 Cameroon 561 G 21 21
296 Cameroon 562 T 21 21
297 Cameroon 563 A 21 21
298 Cameroon 564 G 21 21
299 Cameroon 565 T 21 21
300 Cameroon 566 G 21 21
301 Cameroon 567 G 21 21
302 Cameroon 568 T 21 21
303 Cameroon 569 G 21 21
304 Cameroon 570 A 21 21
305 Cameroon 571 G 21 21
306 Cameroon 572 A 21 21
307 Cameroon 573 C 21 21
308 Cameroon 574 A 21 21
309 Cameroon 575 C 21 21
310 Cameroon 576 T 21 21
311 Cameroon 577 T 21 21
312 Cameroon 578 G 21 21
313 Cameroon 579 G 21 21
314 Cameroon 580 T 21 21
315 Cameroon 581 G 21 21
316 Cameroon 582 T 21 21
317 Cameroon 583 C 21 21
318 Cameroon 584 C 21 21
319 Cameroon 585 T 21 21
320 Cameroon 586 T 21 21
321 Cameroon 587 G 21 21
322 Cameroon 588 T 21 21
323 Cameroon 589 C 21 21
324 Cameroon 590 C 21 21
325 Cameroon 591 C 21 21
326 Cameroon 592 T 21 21
327 Cameroon 593 C T 21 20 His110Tyr
328 Cameroon 594 A 21 21
329 Cameroon 595 T 21 21
330 Cameroon 596 G 21 21
331 Cameroon 597 T 21 20
332 Cameroon 598 G 21 20
333 Cameroon 599 G 21 20
334 Cameroon 600 G 21 20
335 Cameroon 601 C 21 20
336 Cameroon 602 G 21 20
337 Cameroon 603 A 21 20
338 Cameroon 604 A 21 20
339 Cameroon 605 A 21 20
340 Cameroon 606 T 21 20
341 Cameroon 607 A 21 20
342 Cameroon 608 C 21 20
343 Cameroon 609 C 21 20
344 Cameroon 610 A 21 20
345 Cameroon 611 G 21 20
346 Cameroon 612 T 21 20
347 Cameroon 613 G 21 19
348 Cameroon 614 G 21 19
349 Cameroon 615 C 20 18
350 Cameroon 616 T 20 18
351 Cameroon 617 T 20 18
352 Cameroon 618 A 20 18
353 Cameroon 619 C 20 18
354 Cameroon 620 C 20 18
355 Cameroon 621 G 20 18
356 Cameroon 622 C 20 18
357 Cameroon 623 A 20 18
358 Cameroon 624 A 20 18
359 Cameroon 625 G 20 18
360 Cameroon 626 G 20 18
361 Cameroon 627 T 20 18
362 Cameroon 628 T 20 18
363 Cameroon 629 C 20 18
364 Cameroon 630 T 20 18
365 Cameroon 631 T 20 18
366 Cameroon 632 C 20 18
367 Cameroon 633 T 20 18
368 Cameroon 634 T 20 18
369 Cameroon 635 C 20 18
370 Cameroon 636 G 20 18
371 Cameroon 637 T 20 18
372 Cameroon 638 A 20 19
373 Cameroon 639 A 20 19
374 Cameroon 640 G 20 19
375 Cameroon 641 A 20 19
376 Cameroon 642 A 20 19
377 Cameroon 643 C 20 19
378 Cameroon 644 G 20 19
379 Cameroon 645 G 20 20
380 Cameroon 646 T 20 20
381 Cameroon 647 A 20 20
382 Cameroon 648 A 20 20
383 Cameroon 649 T 20 20
384 Cameroon 650 A 20 20
385 Cameroon 651 A 20 20
386 Cameroon 652 A 20 20
387 Cameroon 653 G 20 20
388 Cameroon 654 G 20 20
389 Cameroon 655 A 20 20
390 Cameroon 656 G 20 20
391 Cameroon 657 C 20 20
392 Cameroon 658 T 20 20
393 Cameroon 659 G 20 20
394 Cameroon 660 G 20 20
395 Cameroon 661 T 20 20
396 Cameroon 662 G 20 20
397 Cameroon 663 G 20 20
398 Cameroon 664 C 20 20
399 Cameroon 665 C 20 20
400 Cameroon 666 A 20 20
401 Cameroon 667 T 20 20
402 Cameroon 668 A 20 20
403 Cameroon 669 G 20 20
404 Cameroon 670 T 20 20
405 Cameroon 671 T 20 20
406 Cameroon 672 A 20 20
407 Cameroon 673 C 20 20
408 Cameroon 674 G 20 20
409 Cameroon 675 G 20 20
410 Cameroon 676 C 20 20
411 Cameroon 677 G 20 20
412 Cameroon 678 C 20 20
413 Cameroon 679 C 20 20
414 Cameroon 680 G 20 20
415 Cameroon 681 A 20 20
416 Cameroon 682 T 20 20
417 Cameroon 683 C 20 20
418 Cameroon 684 T 20 20
419 Cameroon 685 A 20 20
420 Cameroon 686 A 20 20
421 Cameroon 687 A 20 20
422 Cameroon 688 G 20 20
423 Cameroon 689 T 20 20
424 Cameroon 690 C 20 20
425 Cameroon 691 A 20 20
426 Cameroon 692 T 20 20
427 Cameroon 693 T 20 20
428 Cameroon 694 T 20 20
429 Cameroon 695 G 20 20
430 Cameroon 696 A 20 20
431 Cameroon 697 C 20 20
432 Cameroon 698 T 20 20
433 Cameroon 699 T 20 20
434 Cameroon 700 A 20 20
435 Cameroon 701 G 20 20
436 Cameroon 702 G 20 20
437 Cameroon 703 C 20 20
438 Cameroon 704 G 20 20
439 Cameroon 705 A 20 20
440 Cameroon 706 C 20 20
441 Cameroon 707 G 20 20
442 Cameroon 708 A 20 20
443 Cameroon 709 G 20 20
444 Cameroon 710 C 20 20
445 Cameroon 711 T 20 20
446 Cameroon 712 T 20 20
447 Cameroon 713 G 20 20
448 Cameroon 714 G 20 20
449 Cameroon 715 C 20 20
450 Cameroon 716 A 20 20
451 Cameroon 717 C 20 20
452 Cameroon 718 T 20 20
453 Cameroon 719 G 20 20
454 Cameroon 720 A 20 20
455 Cameroon 721 T 20 20
456 Cameroon 722 C 20 20
457 Cameroon 723 C 20 20
458 Cameroon 724 T 20 20
459 Cameroon 725 T 20 20
460 Cameroon 726 A 20 20
461 Cameroon 727 T 20 20
462 Cameroon 728 G 20 20
463 Cameroon 729 A 20 20
464 Cameroon 730 A 20 20
465 Cameroon 731 G 20 20
466 Cameroon 732 A 20 20
467 Cameroon 733 T 20 20
468 Cameroon 734 T 20 20
469 Cameroon 735 T 20 20
470 Cameroon 736 T 20 20
471 Cameroon 737 C 20 20
472 Cameroon 738 A 20 20
473 Cameroon 739 A 20 20
474 Cameroon 740 G 20 20
475 Cameroon 741 A 20 20
476 Cameroon 742 A 20 20
477 Cameroon 743 A 20 20
478 Cameroon 744 A 20 20
479 Cameroon 745 C 20 20
480 Cameroon 746 T 20 20
481 Cameroon 747 G 20 20
482 Cameroon 748 G 20 20
483 Cameroon 749 A 20 20
484 Cameroon 750 A 20 20
485 Cameroon 751 C 20 20
486 Cameroon 752 A 20 20
487 Cameroon 753 C 20 20
488 Cameroon 754 T 20 20
489 Cameroon 755 A 20 20
490 Cameroon 756 A 20 20
491 Cameroon 757 A 20 20
492 Cameroon 758 C 20 20
493 Cameroon 759 A 20 20
494 Cameroon 760 T 20 20
495 Cameroon 761 A 20 19
496 Cameroon 762 G 20 19
497 Cameroon 763 C 20 19
498 Cameroon 764 A 20 19
499 Cameroon 765 G 20 19
500 Cameroon 766 T 20 19
501 Cameroon 767 G 20 19
502 Cameroon 768 G 20 19
503 Cameroon 769 T 20 19
504 Cameroon 770 G 20 19
505 Cameroon 771 T 20 19
506 Cameroon 772 T 20 19
507 Cameroon 773 A 20 19
508 Cameroon 774 C 20 19
509 Cameroon 775 C 20 19
510 Cameroon 776 C 20 20
511 Cameroon 777 G 20 20
512 Cameroon 778 T 20 20
513 Cameroon 779 G 20 20
514 Cameroon 780 A 20 20
515 Cameroon 781 A 20 20
516 Cameroon 782 C 20 20
517 Cameroon 783 T 20 20
518 Cameroon 784 C 20 20
519 Cameroon 785 A 20 20
520 Cameroon 786 T 20 20
521 Cameroon 787 G 20 20
522 Cameroon 788 C 20 20
523 Cameroon 789 G 20 20
524 Cameroon 790 T 20 20
525 Cameroon 791 G 20 20
526 Cameroon 792 A 20 20
527 Cameroon 793 G 20 20
528 Cameroon 794 C 20 20
529 Cameroon 795 T 20 20
530 Cameroon 796 T 20 20
531 Cameroon 797 A 20 20
532 Cameroon 798 A 20 20
533 Cameroon 799 C 20 20
534 Cameroon 800 G 20 20
535 Cameroon 801 G 20 20
536 Cameroon 802 A 20 20
537 Cameroon 803 G 20 20
538 Cameroon 804 G 20 20
539 Cameroon 805 G 20 20