National Institute Of Genetic Engineering and Biotechnology

P.I:Mohammad-Ali Malboobi
Here we provide last mutation observed in Nucleocapsid gene of COVID-19 prevalent in Iran.
We kindly wait your comment or coopration in tracking crona virus project.
Amino acid changes

How to read this table:
- Rows are reference amino acids and columns are changed amino acids. E.g. Row 'A' column 'E' indicates how many 'A' amino acids have been replaced by 'E' amino acids.
- Red background colors indicate that more changes happened (heat-map).
- Diagonals are indicated using grey background color
- WARNING: This table may include different translation codon tables (e.g. mamalian DNA and mitochondrial DNA).

  - ? A C D E F G H I K L M N P Q R S T V W Y
-   540                                        
?                                            
A   21                                        
C   3                                        
D   27                                        
E   54                                        
F   15                                        
G   66                                        
H   21                                        
I   9                                        
K   27                                        
L   63                                        
M   9                                        
N   18                                        
P   24                                        
Q   21                                        
R   30                                        
S   30                                        
T   21                                 1      
V   63         1                              
W   3                                        
Y   15                                        

Nucleotide and amino acid mutations

Here we provide list of mutation observed in Nucleocapsid at gene and protein of COVID-19.
-The position column is nucleotide position in reference genome as NC_045512.2
-The Reference column indicate reference nucleotide in NC_045512.2
-The NS column indicate number of samples that this position have been observed
-The NSR column indicate number of samples with reference nucleotide. Therefore diffrenciate related to Ns indicate number of sample with mutated nucleotide
Contoury Position Reference Alt. NSR NS AAchange
0 Bolivia 266 A 27 27
1 Bolivia 267 T 27 27
2 Bolivia 268 G 27 27
3 Bolivia 269 G 27 27
4 Bolivia 270 A 27 27
5 Bolivia 271 G 27 27
6 Bolivia 272 A 27 27
7 Bolivia 273 G 27 27
8 Bolivia 274 C 27 27
9 Bolivia 275 C 27 27
10 Bolivia 276 T 27 27
11 Bolivia 277 T 27 27
12 Bolivia 278 G 27 27
13 Bolivia 279 T 27 27
14 Bolivia 280 C 27 27
15 Bolivia 281 C 27 27
16 Bolivia 282 C 27 27
17 Bolivia 283 T 27 27
18 Bolivia 284 G 27 27
19 Bolivia 285 G 27 27
20 Bolivia 286 T 27 27
21 Bolivia 287 T 27 27
22 Bolivia 288 T 27 27
23 Bolivia 289 C 27 27
24 Bolivia 290 A 27 27
25 Bolivia 291 A 27 27
26 Bolivia 292 C 27 27
27 Bolivia 293 G 27 27
28 Bolivia 294 A 27 27
29 Bolivia 295 G 27 27
30 Bolivia 296 A 27 27
31 Bolivia 297 A 27 27
32 Bolivia 298 A 27 27
33 Bolivia 299 A 27 27
34 Bolivia 300 C 27 27
35 Bolivia 301 A 27 27
36 Bolivia 302 C 27 27
37 Bolivia 303 A 27 27
38 Bolivia 304 C 27 27
39 Bolivia 305 G 27 27
40 Bolivia 306 T 27 27
41 Bolivia 307 C 27 27
42 Bolivia 308 C 27 27
43 Bolivia 309 A 27 27
44 Bolivia 310 A 27 27
45 Bolivia 311 C 27 27
46 Bolivia 312 T 27 27
47 Bolivia 313 C 27 27
48 Bolivia 314 A 27 27
49 Bolivia 315 G 27 27
50 Bolivia 316 T 27 27
51 Bolivia 317 T 27 27
52 Bolivia 318 T 27 27
53 Bolivia 319 G 27 27
54 Bolivia 320 C 27 27
55 Bolivia 321 C 27 27
56 Bolivia 322 T 27 27
57 Bolivia 323 G 27 27
58 Bolivia 324 T 27 27
59 Bolivia 325 T 27 27
60 Bolivia 326 T 27 27
61 Bolivia 327 T 27 27
62 Bolivia 328 A 27 27
63 Bolivia 329 C 27 27
64 Bolivia 330 A 27 27
65 Bolivia 331 G 27 27
66 Bolivia 332 G 27 27
67 Bolivia 333 T 27 27
68 Bolivia 334 T 27 27
69 Bolivia 335 C 27 27
70 Bolivia 336 G 27 27
71 Bolivia 337 C 27 27
72 Bolivia 338 G 27 27
73 Bolivia 339 A 27 27
74 Bolivia 340 C 27 27
75 Bolivia 341 G 27 27
76 Bolivia 342 T 27 27
77 Bolivia 343 G 27 27
78 Bolivia 344 C 27 27
79 Bolivia 345 T 27 27
80 Bolivia 346 C 27 27
81 Bolivia 347 G 27 27
82 Bolivia 348 T 27 27
83 Bolivia 349 A 27 27
84 Bolivia 350 C 27 27
85 Bolivia 351 G 27 27
86 Bolivia 352 T 27 27
87 Bolivia 353 G 27 27
88 Bolivia 354 G 27 27
89 Bolivia 355 C 27 27
90 Bolivia 356 T 27 27
91 Bolivia 357 T 27 27
92 Bolivia 358 T 27 27
93 Bolivia 359 G 27 27
94 Bolivia 360 G 27 27
95 Bolivia 361 A 27 27
96 Bolivia 362 G 27 27
97 Bolivia 363 A 27 27
98 Bolivia 364 C 27 27
99 Bolivia 365 T 27 27
100 Bolivia 366 C 27 27
101 Bolivia 367 C 27 27
102 Bolivia 368 G 27 27
103 Bolivia 369 T 27 27
104 Bolivia 370 G 27 27
105 Bolivia 371 G 27 27
106 Bolivia 372 A 27 27
107 Bolivia 373 G 27 27
108 Bolivia 374 G 27 27
109 Bolivia 375 A 27 27
110 Bolivia 376 G 27 27
111 Bolivia 377 G 27 27
112 Bolivia 378 T 27 27
113 Bolivia 379 C 27 27
114 Bolivia 380 T 27 27
115 Bolivia 381 T 27 27
116 Bolivia 382 A 27 27
117 Bolivia 383 T 27 27
118 Bolivia 384 C 27 27
119 Bolivia 385 A 27 27
120 Bolivia 386 G 27 27
121 Bolivia 387 A 27 27
122 Bolivia 388 G 27 27
123 Bolivia 389 G 27 27
124 Bolivia 390 C 27 27
125 Bolivia 391 A 27 27
126 Bolivia 392 C 27 27
127 Bolivia 393 G 27 27
128 Bolivia 394 T 27 27
129 Bolivia 395 C 27 27
130 Bolivia 396 A 27 27
131 Bolivia 397 A 27 27
132 Bolivia 398 C 27 27
133 Bolivia 399 A 27 27
134 Bolivia 400 T 27 27
135 Bolivia 401 C 27 27
136 Bolivia 402 T 27 27
137 Bolivia 403 T 27 27
138 Bolivia 404 A 27 27
139 Bolivia 405 A 27 27
140 Bolivia 406 A 27 27
141 Bolivia 407 G 27 27
142 Bolivia 408 A 27 27
143 Bolivia 409 T 27 27
144 Bolivia 410 G 27 27
145 Bolivia 411 G 27 27
146 Bolivia 412 C 27 27
147 Bolivia 413 A 27 27
148 Bolivia 414 C 27 27
149 Bolivia 415 T 27 27
150 Bolivia 416 T 27 27
151 Bolivia 417 G 27 27
152 Bolivia 418 T 27 27
153 Bolivia 419 G 27 27
154 Bolivia 420 G 27 27
155 Bolivia 421 C 27 27
156 Bolivia 422 T 27 27
157 Bolivia 423 T 27 27
158 Bolivia 424 A 27 27
159 Bolivia 425 G 27 27
160 Bolivia 426 T 27 27
161 Bolivia 427 A 27 27
162 Bolivia 428 G 27 27
163 Bolivia 429 A 27 27
164 Bolivia 430 A 27 27
165 Bolivia 431 G 27 27
166 Bolivia 432 T 27 27
167 Bolivia 433 T 27 27
168 Bolivia 434 G 27 27
169 Bolivia 435 A 27 27
170 Bolivia 436 A 27 27
171 Bolivia 437 A 27 27
172 Bolivia 438 A 27 27
173 Bolivia 439 A 27 27
174 Bolivia 440 G 27 27
175 Bolivia 441 G 27 27
176 Bolivia 442 C 27 27
177 Bolivia 443 G 27 27
178 Bolivia 444 T 27 27
179 Bolivia 445 T 27 27
180 Bolivia 446 T 27 27
181 Bolivia 447 T 27 27
182 Bolivia 448 G 27 27
183 Bolivia 449 C 27 27
184 Bolivia 450 C 27 27
185 Bolivia 451 T 27 27
186 Bolivia 452 C 27 27
187 Bolivia 453 A 27 27
188 Bolivia 454 A 27 27
189 Bolivia 455 C 27 27
190 Bolivia 456 T 27 27
191 Bolivia 457 T 27 27
192 Bolivia 458 G 27 27
193 Bolivia 459 A 27 27
194 Bolivia 460 A 27 27
195 Bolivia 461 C 27 27
196 Bolivia 462 A 27 27
197 Bolivia 463 G 27 27
198 Bolivia 464 C 27 27
199 Bolivia 465 C 27 27
200 Bolivia 466 C 27 27
201 Bolivia 467 T 27 27
202 Bolivia 468 A 27 27
203 Bolivia 469 T 27 27
204 Bolivia 470 G 27 27
205 Bolivia 471 T 27 27
206 Bolivia 472 G 27 27
207 Bolivia 473 T 27 27
208 Bolivia 474 T 27 27
209 Bolivia 475 C 27 27
210 Bolivia 476 A 27 27
211 Bolivia 477 T 27 27
212 Bolivia 478 C 27 27
213 Bolivia 479 A 27 27
214 Bolivia 480 A 27 27
215 Bolivia 481 A 27 27
216 Bolivia 482 C 27 27
217 Bolivia 483 G 27 27
218 Bolivia 484 T 27 27
219 Bolivia 485 T 27 27
220 Bolivia 486 C 27 27
221 Bolivia 487 G 27 27
222 Bolivia 488 G 27 27
223 Bolivia 489 A 27 27
224 Bolivia 490 T 27 27
225 Bolivia 491 G 27 27
226 Bolivia 492 C 27 27
227 Bolivia 493 T 27 27
228 Bolivia 494 C 27 27
229 Bolivia 495 G 27 27
230 Bolivia 496 A 27 27
231 Bolivia 497 A 27 27
232 Bolivia 498 C 27 27
233 Bolivia 499 T 27 27
234 Bolivia 500 G 27 27
235 Bolivia 501 C 27 27
236 Bolivia 502 A 27 27
237 Bolivia 503 C 27 27
238 Bolivia 504 C 27 27
239 Bolivia 505 T 27 27
240 Bolivia 506 C 27 27
241 Bolivia 507 A 27 27
242 Bolivia 508 T 27 27
243 Bolivia 509 G 27 27
244 Bolivia 510 G 27 27
245 Bolivia 511 T 27 27
246 Bolivia 512 C 27 27
247 Bolivia 513 A 27 27
248 Bolivia 514 T 27 27
249 Bolivia 515 G 27 27
250 Bolivia 516 T 27 27
251 Bolivia 517 T 27 27
252 Bolivia 518 A 27 27
253 Bolivia 519 T 27 27
254 Bolivia 520 G 27 27
255 Bolivia 521 G T 27 26 Val86Phe
256 Bolivia 522 T 27 27
257 Bolivia 523 T 27 27
258 Bolivia 524 G 27 27
259 Bolivia 525 A 27 27
260 Bolivia 526 G 27 27
261 Bolivia 527 C 27 27
262 Bolivia 528 T 27 27
263 Bolivia 529 G 27 27
264 Bolivia 530 G 27 27
265 Bolivia 531 T 27 27
266 Bolivia 532 A 27 27
267 Bolivia 533 G 27 27
268 Bolivia 534 C 27 27
269 Bolivia 535 A 27 27
270 Bolivia 536 G 27 27
271 Bolivia 537 A 27 27
272 Bolivia 538 A 27 27
273 Bolivia 539 C 27 27
274 Bolivia 540 T 27 27
275 Bolivia 541 C 27 27
276 Bolivia 542 G 27 27
277 Bolivia 543 A 27 27
278 Bolivia 544 A 27 27
279 Bolivia 545 G 27 27
280 Bolivia 546 G 27 27
281 Bolivia 547 C 27 27
282 Bolivia 548 A 27 27
283 Bolivia 549 T 27 27
284 Bolivia 550 T 27 27
285 Bolivia 551 C 27 27
286 Bolivia 552 A 27 27
287 Bolivia 553 G 27 27
288 Bolivia 554 T 27 27
289 Bolivia 555 A 27 27
290 Bolivia 556 C 27 27
291 Bolivia 557 G 27 27
292 Bolivia 558 G 27 27
293 Bolivia 559 T 27 27
294 Bolivia 560 C 27 27
295 Bolivia 561 G 27 27
296 Bolivia 562 T 27 27
297 Bolivia 563 A 27 27
298 Bolivia 564 G 27 27
299 Bolivia 565 T 27 27
300 Bolivia 566 G 27 27
301 Bolivia 567 G 27 27
302 Bolivia 568 T 27 27
303 Bolivia 569 G 27 27
304 Bolivia 570 A 27 27
305 Bolivia 571 G 27 27
306 Bolivia 572 A 27 27
307 Bolivia 573 C 27 27
308 Bolivia 574 A 27 27
309 Bolivia 575 C 27 27
310 Bolivia 576 T 27 27
311 Bolivia 577 T 27 27
312 Bolivia 578 G 27 27
313 Bolivia 579 G 27 27
314 Bolivia 580 T 27 27
315 Bolivia 581 G 27 27
316 Bolivia 582 T 27 27
317 Bolivia 583 C 27 27
318 Bolivia 584 C 27 27
319 Bolivia 585 T 27 27
320 Bolivia 586 T 27 27
321 Bolivia 587 G 27 27
322 Bolivia 588 T 27 27
323 Bolivia 589 C 27 27
324 Bolivia 590 C 27 27
325 Bolivia 591 C 27 27
326 Bolivia 592 T 27 27
327 Bolivia 593 C 27 27
328 Bolivia 594 A 27 27
329 Bolivia 595 T 27 27
330 Bolivia 596 G 27 27
331 Bolivia 597 T 27 27
332 Bolivia 598 G 27 27
333 Bolivia 599 G 27 27
334 Bolivia 600 G 27 27
335 Bolivia 601 C 27 27
336 Bolivia 602 G 27 27
337 Bolivia 603 A 27 27
338 Bolivia 604 A 27 27
339 Bolivia 605 A 27 27
340 Bolivia 606 T 27 27
341 Bolivia 607 A 27 27
342 Bolivia 608 C 27 27
343 Bolivia 609 C 27 27
344 Bolivia 610 A 27 27
345 Bolivia 611 G 27 27
346 Bolivia 612 T 27 27
347 Bolivia 613 G 27 27
348 Bolivia 614 G 27 27
349 Bolivia 615 C 27 27
350 Bolivia 616 T 27 27
351 Bolivia 617 T 27 27
352 Bolivia 618 A 27 27
353 Bolivia 619 C 27 27
354 Bolivia 620 C 27 27
355 Bolivia 621 G 27 27
356 Bolivia 622 C 27 27
357 Bolivia 623 A 27 27
358 Bolivia 624 A 27 27
359 Bolivia 625 G 27 27
360 Bolivia 626 G 27 27
361 Bolivia 627 T 27 27
362 Bolivia 628 T 27 27
363 Bolivia 629 C 27 27
364 Bolivia 630 T 27 27
365 Bolivia 631 T 27 27
366 Bolivia 632 C 27 27
367 Bolivia 633 T 27 27
368 Bolivia 634 T 27 27
369 Bolivia 635 C 27 27
370 Bolivia 636 G 27 27
371 Bolivia 637 T 27 27
372 Bolivia 638 A 27 27
373 Bolivia 639 A 27 27
374 Bolivia 640 G 27 27
375 Bolivia 641 A 27 27
376 Bolivia 642 A 27 27
377 Bolivia 643 C 27 27
378 Bolivia 644 G 27 27
379 Bolivia 645 G 27 27
380 Bolivia 646 T 27 27
381 Bolivia 647 A 27 27
382 Bolivia 648 A 27 27
383 Bolivia 649 T 27 27
384 Bolivia 650 A 27 27
385 Bolivia 651 A 27 27
386 Bolivia 652 A 27 27
387 Bolivia 653 G 27 27
388 Bolivia 654 G 27 27
389 Bolivia 655 A 27 27
390 Bolivia 656 G 27 27
391 Bolivia 657 C 27 27
392 Bolivia 658 T 27 27
393 Bolivia 659 G 27 27
394 Bolivia 660 G 27 27
395 Bolivia 661 T 27 27
396 Bolivia 662 G 27 27
397 Bolivia 663 G 27 27
398 Bolivia 664 C 27 27
399 Bolivia 665 C 27 27
400 Bolivia 666 A 27 27
401 Bolivia 667 T 27 27
402 Bolivia 668 A 27 27
403 Bolivia 669 G 27 27
404 Bolivia 670 T 27 27
405 Bolivia 671 T 27 27
406 Bolivia 672 A 27 27
407 Bolivia 673 C 27 27
408 Bolivia 674 G 27 27
409 Bolivia 675 G 27 27
410 Bolivia 676 C 27 27
411 Bolivia 677 G 27 27
412 Bolivia 678 C 27 27
413 Bolivia 679 C 27 27
414 Bolivia 680 G 27 27
415 Bolivia 681 A 27 27
416 Bolivia 682 T 27 27
417 Bolivia 683 C 27 27
418 Bolivia 684 T 27 27
419 Bolivia 685 A 27 27
420 Bolivia 686 A 27 27
421 Bolivia 687 A 27 27
422 Bolivia 688 G 27 27
423 Bolivia 689 T 27 27
424 Bolivia 690 C 27 27
425 Bolivia 691 A 27 27
426 Bolivia 692 T 27 27
427 Bolivia 693 T 27 27
428 Bolivia 694 T 27 27
429 Bolivia 695 G 27 27
430 Bolivia 696 A 27 27
431 Bolivia 697 C 27 27
432 Bolivia 698 T 27 27
433 Bolivia 699 T 27 27
434 Bolivia 700 A 27 27
435 Bolivia 701 G 27 27
436 Bolivia 702 G 27 27
437 Bolivia 703 C 27 27
438 Bolivia 704 G 27 27
439 Bolivia 705 A 27 27
440 Bolivia 706 C 27 27
441 Bolivia 707 G 27 27
442 Bolivia 708 A 27 27
443 Bolivia 709 G 27 27
444 Bolivia 710 C 27 27
445 Bolivia 711 T 27 27
446 Bolivia 712 T 27 27
447 Bolivia 713 G 27 27
448 Bolivia 714 G 27 27
449 Bolivia 715 C 27 27
450 Bolivia 716 A 27 27
451 Bolivia 717 C 27 27
452 Bolivia 718 T 27 27
453 Bolivia 719 G 27 27
454 Bolivia 720 A 27 27
455 Bolivia 721 T 27 27
456 Bolivia 722 C 27 27
457 Bolivia 723 C 27 27
458 Bolivia 724 T 27 27
459 Bolivia 725 T 27 27
460 Bolivia 726 A 27 27
461 Bolivia 727 T 27 27
462 Bolivia 728 G 27 27
463 Bolivia 729 A 27 27
464 Bolivia 730 A 27 27
465 Bolivia 731 G 27 27
466 Bolivia 732 A 27 27
467 Bolivia 733 T 27 27
468 Bolivia 734 T 27 27
469 Bolivia 735 T 27 27
470 Bolivia 736 T 27 27
471 Bolivia 737 C 27 27
472 Bolivia 738 A 27 27
473 Bolivia 739 A 27 27
474 Bolivia 740 G 27 27
475 Bolivia 741 A 27 27
476 Bolivia 742 A 27 27
477 Bolivia 743 A 27 27
478 Bolivia 744 A 27 27
479 Bolivia 745 C 27 27
480 Bolivia 746 T 27 27
481 Bolivia 747 G 27 27
482 Bolivia 748 G 27 27
483 Bolivia 749 A 27 27
484 Bolivia 750 A 27 27
485 Bolivia 751 C 27 27
486 Bolivia 752 A 27 27
487 Bolivia 753 C 27 27
488 Bolivia 754 T 27 27
489 Bolivia 755 A 27 27
490 Bolivia 756 A 27 27
491 Bolivia 757 A 27 27
492 Bolivia 758 C 27 27
493 Bolivia 759 A 27 27
494 Bolivia 760 T 27 27
495 Bolivia 761 A 27 27
496 Bolivia 762 G 27 27
497 Bolivia 763 C 27 27
498 Bolivia 764 A 27 27
499 Bolivia 765 G 27 27
500 Bolivia 766 T 27 27
501 Bolivia 767 G 27 27
502 Bolivia 768 G 27 27
503 Bolivia 769 T 27 27
504 Bolivia 770 G 27 27
505 Bolivia 771 T 27 27
506 Bolivia 772 T 27 27
507 Bolivia 773 A 27 27
508 Bolivia 774 C 27 27
509 Bolivia 775 C T 27 26 Thr170Thr
510 Bolivia 776 C 27 27
511 Bolivia 777 G 27 27
512 Bolivia 778 T 27 27
513 Bolivia 779 G 27 27
514 Bolivia 780 A 27 27
515 Bolivia 781 A 27 27
516 Bolivia 782 C 27 27
517 Bolivia 783 T 27 27
518 Bolivia 784 C 27 27
519 Bolivia 785 A 27 27
520 Bolivia 786 T 27 27
521 Bolivia 787 G 27 27
522 Bolivia 788 C 27 27
523 Bolivia 789 G 27 27
524 Bolivia 790 T 27 27
525 Bolivia 791 G 27 27
526 Bolivia 792 A 27 27
527 Bolivia 793 G 27 27
528 Bolivia 794 C 27 27
529 Bolivia 795 T 27 27
530 Bolivia 796 T 27 27
531 Bolivia 797 A 27 27
532 Bolivia 798 A 27 27
533 Bolivia 799 C 27 27
534 Bolivia 800 G 27 27
535 Bolivia 801 G 27 27
536 Bolivia 802 A 27 27
537 Bolivia 803 G 27 27
538 Bolivia 804 G 27 27
539 Bolivia 805 G 27 27