National Institute Of Genetic Engineering and Biotechnology

P.I:Mohammad-Ali Malboobi
Here we provide last mutation observed in Nucleocapsid gene of COVID-19 prevalent in Iran.
We kindly wait your comment or coopration in tracking crona virus project.
Amino acid changes

How to read this table:
- Rows are reference amino acids and columns are changed amino acids. E.g. Row 'A' column 'E' indicates how many 'A' amino acids have been replaced by 'E' amino acids.
- Red background colors indicate that more changes happened (heat-map).
- Diagonals are indicated using grey background color
- WARNING: This table may include different translation codon tables (e.g. mamalian DNA and mitochondrial DNA).

  - ? A C D E F G H I K L M N P Q R S T V W Y
-   540                                        
?                                            
A   21                                        
C   3                                        
D   27                                        
E   54                 1                      
F   15                                        
G   66                                        
H   21                                       1
I   9                                        
K   27                                        
L   63               1                        
M   9                                        
N   18                                        
P   24                                 1      
Q   21                                        
R   30                                        
S   30                                        
T   21                                        
V   63                                        
W   3                                        
Y   15                                        

Nucleotide and amino acid mutations

Here we provide list of mutation observed in Nucleocapsid at gene and protein of COVID-19.
-The position column is nucleotide position in reference genome as NC_045512.2
-The Reference column indicate reference nucleotide in NC_045512.2
-The NS column indicate number of samples that this position have been observed
-The NSR column indicate number of samples with reference nucleotide. Therefore diffrenciate related to Ns indicate number of sample with mutated nucleotide
Contoury Position Reference Alt. NSR NS AAchange
0 Belarus 266 A 35 35
1 Belarus 267 T 35 35
2 Belarus 268 G 35 35
3 Belarus 269 G 35 35
4 Belarus 270 A 35 35
5 Belarus 271 G 35 35
6 Belarus 272 A 35 35
7 Belarus 273 G 35 35
8 Belarus 274 C 35 35
9 Belarus 275 C 35 35
10 Belarus 276 T 35 35
11 Belarus 277 T 35 35
12 Belarus 278 G 35 35
13 Belarus 279 T 35 35
14 Belarus 280 C 35 35
15 Belarus 281 C 35 35
16 Belarus 282 C 35 35
17 Belarus 283 T 35 35
18 Belarus 284 G 35 35
19 Belarus 285 G 35 35
20 Belarus 286 T 35 35
21 Belarus 287 T 35 35
22 Belarus 288 T 35 35
23 Belarus 289 C 35 35
24 Belarus 290 A 35 35
25 Belarus 291 A 35 35
26 Belarus 292 C 35 35
27 Belarus 293 G 35 35
28 Belarus 294 A 35 35
29 Belarus 295 G 35 35
30 Belarus 296 A 35 35
31 Belarus 297 A 35 35
32 Belarus 298 A 35 35
33 Belarus 299 A 35 35
34 Belarus 300 C 35 35
35 Belarus 301 A 35 35
36 Belarus 302 C 35 35
37 Belarus 303 A 35 35
38 Belarus 304 C 35 35
39 Belarus 305 G 35 35
40 Belarus 306 T 35 35
41 Belarus 307 C 35 35
42 Belarus 308 C 35 35
43 Belarus 309 A 35 35
44 Belarus 310 A 35 35
45 Belarus 311 C 35 35
46 Belarus 312 T 35 35
47 Belarus 313 C 35 35
48 Belarus 314 A 35 35
49 Belarus 315 G 35 35
50 Belarus 316 T 35 35
51 Belarus 317 T 35 35
52 Belarus 318 T 35 35
53 Belarus 319 G 35 35
54 Belarus 320 C 35 35
55 Belarus 321 C 35 35
56 Belarus 322 T 35 35
57 Belarus 323 G 35 35
58 Belarus 324 T 35 35
59 Belarus 325 T 35 35
60 Belarus 326 T 35 35
61 Belarus 327 T 35 35
62 Belarus 328 A 35 35
63 Belarus 329 C 35 35
64 Belarus 330 A 35 35
65 Belarus 331 G 35 35
66 Belarus 332 G 35 35
67 Belarus 333 T 35 35
68 Belarus 334 T 35 35
69 Belarus 335 C 35 35
70 Belarus 336 G 35 35
71 Belarus 337 C 35 35
72 Belarus 338 G 35 35
73 Belarus 339 A 35 35
74 Belarus 340 C 35 35
75 Belarus 341 G 35 35
76 Belarus 342 T 35 35
77 Belarus 343 G 35 35
78 Belarus 344 C A 35 32 Leu27Ile
79 Belarus 345 T 35 35
80 Belarus 346 C 35 35
81 Belarus 347 G 35 35
82 Belarus 348 T 35 35
83 Belarus 349 A 35 35
84 Belarus 350 C 35 35
85 Belarus 351 G 35 35
86 Belarus 352 T 35 35
87 Belarus 353 G 35 35
88 Belarus 354 G 35 35
89 Belarus 355 C 35 35
90 Belarus 356 T 35 35
91 Belarus 357 T 35 35
92 Belarus 358 T 35 35
93 Belarus 359 G 35 35
94 Belarus 360 G 35 35
95 Belarus 361 A 35 35
96 Belarus 362 G 35 35
97 Belarus 363 A 35 35
98 Belarus 364 C 35 35
99 Belarus 365 T 35 35
100 Belarus 366 C 35 35
101 Belarus 367 C 35 35
102 Belarus 368 G 35 35
103 Belarus 369 T 35 35
104 Belarus 370 G 35 35
105 Belarus 371 G 35 35
106 Belarus 372 A 35 35
107 Belarus 373 G 35 35
108 Belarus 374 G 35 35
109 Belarus 375 A 35 35
110 Belarus 376 G 35 35
111 Belarus 377 G 35 35
112 Belarus 378 T 35 35
113 Belarus 379 C 35 35
114 Belarus 380 T 35 35
115 Belarus 381 T 35 35
116 Belarus 382 A 35 35
117 Belarus 383 T 35 35
118 Belarus 384 C 35 35
119 Belarus 385 A 35 35
120 Belarus 386 G 35 35
121 Belarus 387 A 35 35
122 Belarus 388 G 35 35
123 Belarus 389 G 35 35
124 Belarus 390 C 35 35
125 Belarus 391 A 35 35
126 Belarus 392 C 35 35
127 Belarus 393 G 35 35
128 Belarus 394 T 35 35
129 Belarus 395 C 35 35
130 Belarus 396 A 35 35
131 Belarus 397 A 35 35
132 Belarus 398 C 35 35
133 Belarus 399 A 35 35
134 Belarus 400 T 35 35
135 Belarus 401 C 35 35
136 Belarus 402 T 35 35
137 Belarus 403 T 35 35
138 Belarus 404 A 35 35
139 Belarus 405 A 35 35
140 Belarus 406 A 35 35
141 Belarus 407 G 35 35
142 Belarus 408 A 35 35
143 Belarus 409 T 35 35
144 Belarus 410 G 35 35
145 Belarus 411 G 35 35
146 Belarus 412 C 35 35
147 Belarus 413 A 35 35
148 Belarus 414 C 35 35
149 Belarus 415 T 35 35
150 Belarus 416 T 35 35
151 Belarus 417 G 35 35
152 Belarus 418 T 35 35
153 Belarus 419 G 35 35
154 Belarus 420 G 35 35
155 Belarus 421 C 35 35
156 Belarus 422 T 35 35
157 Belarus 423 T 35 35
158 Belarus 424 A 35 35
159 Belarus 425 G 35 35
160 Belarus 426 T 35 35
161 Belarus 427 A 35 35
162 Belarus 428 G 35 35
163 Belarus 429 A 35 35
164 Belarus 430 A 35 35
165 Belarus 431 G 35 35
166 Belarus 432 T 35 35
167 Belarus 433 T 35 35
168 Belarus 434 G 35 35
169 Belarus 435 A 35 35
170 Belarus 436 A 35 35
171 Belarus 437 A 35 35
172 Belarus 438 A 35 35
173 Belarus 439 A 35 35
174 Belarus 440 G 35 35
175 Belarus 441 G 35 35
176 Belarus 442 C 35 35
177 Belarus 443 G 35 35
178 Belarus 444 T 35 35
179 Belarus 445 T 35 35
180 Belarus 446 T 35 35
181 Belarus 447 T 35 35
182 Belarus 448 G 35 35
183 Belarus 449 C 35 35
184 Belarus 450 C 35 35
185 Belarus 451 T 35 35
186 Belarus 452 C 35 35
187 Belarus 453 A 35 35
188 Belarus 454 A 35 35
189 Belarus 455 C 35 35
190 Belarus 456 T 35 35
191 Belarus 457 T 35 35
192 Belarus 458 G 35 35
193 Belarus 459 A 35 35
194 Belarus 460 A 35 35
195 Belarus 461 C 35 35
196 Belarus 462 A 35 35
197 Belarus 463 G 35 35
198 Belarus 464 C 35 35
199 Belarus 465 C 35 35
200 Belarus 466 C 35 35
201 Belarus 467 T 35 35
202 Belarus 468 A 35 35
203 Belarus 469 T 35 35
204 Belarus 470 G 35 35
205 Belarus 471 T 35 35
206 Belarus 472 G 35 35
207 Belarus 473 T 35 35
208 Belarus 474 T 35 35
209 Belarus 475 C 35 35
210 Belarus 476 A 35 35
211 Belarus 477 T 35 35
212 Belarus 478 C 35 35
213 Belarus 479 A 35 35
214 Belarus 480 A 35 35
215 Belarus 481 A 35 35
216 Belarus 482 C 35 35
217 Belarus 483 G 35 35
218 Belarus 484 T 35 35
219 Belarus 485 T 35 35
220 Belarus 486 C 35 35
221 Belarus 487 G 35 35
222 Belarus 488 G 35 35
223 Belarus 489 A 35 35
224 Belarus 490 T 35 35
225 Belarus 491 G 35 35
226 Belarus 492 C 35 35
227 Belarus 493 T 35 35
228 Belarus 494 C 35 35
229 Belarus 495 G 35 35
230 Belarus 496 A 35 35
231 Belarus 497 A 35 35
232 Belarus 498 C 35 35
233 Belarus 499 T 35 35
234 Belarus 500 G 35 35
235 Belarus 501 C 35 35
236 Belarus 502 A 35 35
237 Belarus 503 C A 35 34 Pro80Thr
238 Belarus 504 C 35 35
239 Belarus 505 T 35 35
240 Belarus 506 C 35 35
241 Belarus 507 A 35 35
242 Belarus 508 T 35 35
243 Belarus 509 G 35 35
244 Belarus 510 G 35 35
245 Belarus 511 T 35 35
246 Belarus 512 C 35 35
247 Belarus 513 A 35 35
248 Belarus 514 T 35 35
249 Belarus 515 G 35 35
250 Belarus 516 T 35 35
251 Belarus 517 T 35 35
252 Belarus 518 A 35 35
253 Belarus 519 T 35 35
254 Belarus 520 G 35 35
255 Belarus 521 G 35 35
256 Belarus 522 T 35 35
257 Belarus 523 T 35 35
258 Belarus 524 G 35 35
259 Belarus 525 A 35 35
260 Belarus 526 G 35 35
261 Belarus 527 C 35 35
262 Belarus 528 T 35 35
263 Belarus 529 G 35 35
264 Belarus 530 G 35 35
265 Belarus 531 T 35 35
266 Belarus 532 A 35 35
267 Belarus 533 G 35 35
268 Belarus 534 C 35 35
269 Belarus 535 A 35 35
270 Belarus 536 G 35 35
271 Belarus 537 A 35 35
272 Belarus 538 A 35 35
273 Belarus 539 C 35 35
274 Belarus 540 T 35 35
275 Belarus 541 C 35 35
276 Belarus 542 G 35 35
277 Belarus 543 A 35 35
278 Belarus 544 A 35 35
279 Belarus 545 G 35 35
280 Belarus 546 G 35 35
281 Belarus 547 C 35 35
282 Belarus 548 A 35 35
283 Belarus 549 T 35 35
284 Belarus 550 T 35 35
285 Belarus 551 C 35 35
286 Belarus 552 A 35 35
287 Belarus 553 G 35 35
288 Belarus 554 T 35 35
289 Belarus 555 A 35 35
290 Belarus 556 C 35 35
291 Belarus 557 G 35 35
292 Belarus 558 G 35 35
293 Belarus 559 T 35 35
294 Belarus 560 C 35 35
295 Belarus 561 G 35 35
296 Belarus 562 T 35 35
297 Belarus 563 A 35 35
298 Belarus 564 G 35 35
299 Belarus 565 T 35 35
300 Belarus 566 G 35 35
301 Belarus 567 G 35 35
302 Belarus 568 T 35 35
303 Belarus 569 G 35 35
304 Belarus 570 A 35 35
305 Belarus 571 G 35 35
306 Belarus 572 A 35 35
307 Belarus 573 C 35 35
308 Belarus 574 A 35 35
309 Belarus 575 C 35 35
310 Belarus 576 T 35 35
311 Belarus 577 T 35 35
312 Belarus 578 G 35 35
313 Belarus 579 G 35 35
314 Belarus 580 T 35 35
315 Belarus 581 G 35 35
316 Belarus 582 T 35 35
317 Belarus 583 C 35 35
318 Belarus 584 C 35 35
319 Belarus 585 T 35 35
320 Belarus 586 T 35 35
321 Belarus 587 G 35 35
322 Belarus 588 T 35 35
323 Belarus 589 C 35 35
324 Belarus 590 C 35 35
325 Belarus 591 C 35 35
326 Belarus 592 T 35 35
327 Belarus 593 C T 35 34 His110Tyr
328 Belarus 594 A 35 35
329 Belarus 595 T 35 35
330 Belarus 596 G 35 35
331 Belarus 597 T 35 35
332 Belarus 598 G 35 35
333 Belarus 599 G 35 35
334 Belarus 600 G 35 35
335 Belarus 601 C 35 35
336 Belarus 602 G 35 35
337 Belarus 603 A 35 35
338 Belarus 604 A 35 35
339 Belarus 605 A 35 35
340 Belarus 606 T 35 35
341 Belarus 607 A 35 35
342 Belarus 608 C 35 35
343 Belarus 609 C 35 35
344 Belarus 610 A 35 35
345 Belarus 611 G 35 35
346 Belarus 612 T 35 35
347 Belarus 613 G 35 35
348 Belarus 614 G 35 35
349 Belarus 615 C 35 35
350 Belarus 616 T 35 35
351 Belarus 617 T 35 35
352 Belarus 618 A 35 35
353 Belarus 619 C 35 35
354 Belarus 620 C 35 35
355 Belarus 621 G 35 35
356 Belarus 622 C 35 35
357 Belarus 623 A 35 35
358 Belarus 624 A 35 35
359 Belarus 625 G 35 35
360 Belarus 626 G 35 35
361 Belarus 627 T 35 35
362 Belarus 628 T 35 35
363 Belarus 629 C 35 35
364 Belarus 630 T 35 35
365 Belarus 631 T 35 35
366 Belarus 632 C 35 35
367 Belarus 633 T 35 35
368 Belarus 634 T 35 35
369 Belarus 635 C 35 35
370 Belarus 636 G 35 35
371 Belarus 637 T 35 35
372 Belarus 638 A 35 35
373 Belarus 639 A 35 35
374 Belarus 640 G 35 35
375 Belarus 641 A 35 35
376 Belarus 642 A 35 35
377 Belarus 643 C 35 35
378 Belarus 644 G 35 35
379 Belarus 645 G 35 35
380 Belarus 646 T 35 35
381 Belarus 647 A 35 35
382 Belarus 648 A 35 35
383 Belarus 649 T 35 35
384 Belarus 650 A 35 35
385 Belarus 651 A 35 35
386 Belarus 652 A 35 35
387 Belarus 653 G 35 35
388 Belarus 654 G 35 35
389 Belarus 655 A 35 35
390 Belarus 656 G 35 35
391 Belarus 657 C 35 35
392 Belarus 658 T 35 35
393 Belarus 659 G 35 35
394 Belarus 660 G 35 35
395 Belarus 661 T 35 35
396 Belarus 662 G 35 35
397 Belarus 663 G 35 35
398 Belarus 664 C 35 35
399 Belarus 665 C 35 35
400 Belarus 666 A 35 35
401 Belarus 667 T 35 35
402 Belarus 668 A 35 35
403 Belarus 669 G 35 35
404 Belarus 670 T 35 35
405 Belarus 671 T 35 35
406 Belarus 672 A 35 35
407 Belarus 673 C 35 35
408 Belarus 674 G 35 35
409 Belarus 675 G 35 35
410 Belarus 676 C 35 35
411 Belarus 677 G 35 35
412 Belarus 678 C 35 35
413 Belarus 679 C 35 35
414 Belarus 680 G 35 35
415 Belarus 681 A 35 35
416 Belarus 682 T 35 35
417 Belarus 683 C 35 35
418 Belarus 684 T 35 35
419 Belarus 685 A 35 35
420 Belarus 686 A 35 35
421 Belarus 687 A 35 35
422 Belarus 688 G 35 35
423 Belarus 689 T 35 35
424 Belarus 690 C 35 35
425 Belarus 691 A 35 35
426 Belarus 692 T 35 35
427 Belarus 693 T 35 35
428 Belarus 694 T 35 35
429 Belarus 695 G 35 35
430 Belarus 696 A 35 35
431 Belarus 697 C 35 35
432 Belarus 698 T 35 35
433 Belarus 699 T 35 35
434 Belarus 700 A 35 35
435 Belarus 701 G 35 35
436 Belarus 702 G 35 35
437 Belarus 703 C 35 35
438 Belarus 704 G 35 35
439 Belarus 705 A 35 35
440 Belarus 706 C 35 35
441 Belarus 707 G A 35 34 Glu148Lys
442 Belarus 708 A 35 35
443 Belarus 709 G 35 35
444 Belarus 710 C 35 35
445 Belarus 711 T 35 35
446 Belarus 712 T 35 35
447 Belarus 713 G 35 35
448 Belarus 714 G 35 35
449 Belarus 715 C 35 35
450 Belarus 716 A 35 35
451 Belarus 717 C 35 35
452 Belarus 718 T 35 35
453 Belarus 719 G 35 35
454 Belarus 720 A 35 35
455 Belarus 721 T 35 35
456 Belarus 722 C 35 35
457 Belarus 723 C 35 35
458 Belarus 724 T 35 35
459 Belarus 725 T 35 35
460 Belarus 726 A 35 35
461 Belarus 727 T 35 35
462 Belarus 728 G 35 35
463 Belarus 729 A 35 35
464 Belarus 730 A 35 35
465 Belarus 731 G 35 35
466 Belarus 732 A 35 35
467 Belarus 733 T 35 35
468 Belarus 734 T 35 35
469 Belarus 735 T 35 35
470 Belarus 736 T 35 35
471 Belarus 737 C 35 35
472 Belarus 738 A 35 35
473 Belarus 739 A 35 35
474 Belarus 740 G 35 35
475 Belarus 741 A 35 35
476 Belarus 742 A 35 35
477 Belarus 743 A 35 35
478 Belarus 744 A 35 35
479 Belarus 745 C 35 35
480 Belarus 746 T 35 35
481 Belarus 747 G 35 35
482 Belarus 748 G 35 35
483 Belarus 749 A 35 35
484 Belarus 750 A 35 35
485 Belarus 751 C 35 35
486 Belarus 752 A 35 35
487 Belarus 753 C 35 35
488 Belarus 754 T 35 35
489 Belarus 755 A 35 35
490 Belarus 756 A 35 35
491 Belarus 757 A 35 35
492 Belarus 758 C 35 35
493 Belarus 759 A 35 35
494 Belarus 760 T 35 35
495 Belarus 761 A 35 35
496 Belarus 762 G 35 35
497 Belarus 763 C 35 35
498 Belarus 764 A 35 35
499 Belarus 765 G 35 35
500 Belarus 766 T 35 35
501 Belarus 767 G 35 35
502 Belarus 768 G 35 35
503 Belarus 769 T 35 35
504 Belarus 770 G 35 35
505 Belarus 771 T 35 35
506 Belarus 772 T 35 35
507 Belarus 773 A 35 35
508 Belarus 774 C 35 35
509 Belarus 775 C 35 35
510 Belarus 776 C 35 35
511 Belarus 777 G 35 35
512 Belarus 778 T 35 35
513 Belarus 779 G 35 35
514 Belarus 780 A 35 35
515 Belarus 781 A 35 35
516 Belarus 782 C 35 35
517 Belarus 783 T 35 35
518 Belarus 784 C 35 35
519 Belarus 785 A 35 35
520 Belarus 786 T 35 35
521 Belarus 787 G 35 35
522 Belarus 788 C 35 35
523 Belarus 789 G 35 35
524 Belarus 790 T 35 35
525 Belarus 791 G 35 35
526 Belarus 792 A 35 35
527 Belarus 793 G 35 35
528 Belarus 794 C 35 35
529 Belarus 795 T 35 35
530 Belarus 796 T 35 35
531 Belarus 797 A 35 35
532 Belarus 798 A 35 35
533 Belarus 799 C 35 35
534 Belarus 800 G 35 35
535 Belarus 801 G 35 35
536 Belarus 802 A 35 35
537 Belarus 803 G 35 35
538 Belarus 804 G 35 35
539 Belarus 805 G 35 35