National Institute Of Genetic Engineering and Biotechnology

P.I:Mohammad-Ali Malboobi
Here we provide last mutation observed in Nucleocapsid gene of COVID-19 prevalent in Iran.
We kindly wait your comment or coopration in tracking crona virus project.
Amino acid changes

How to read this table:
- Rows are reference amino acids and columns are changed amino acids. E.g. Row 'A' column 'E' indicates how many 'A' amino acids have been replaced by 'E' amino acids.
- Red background colors indicate that more changes happened (heat-map).
- Diagonals are indicated using grey background color
- WARNING: This table may include different translation codon tables (e.g. mamalian DNA and mitochondrial DNA).

  - ? A C D E F G H I K L M N P Q R S T V W Y
-   540                                        
?                                            
A   21 1                                      
C   3                                        
D   27                                        
E   54     1                                  
F   15                                        
G   66   1       1                            
H   21                                        
I   9                                        
K   27                                        
L   63                   3                    
M   9                                        
N   18                                        
P   24                         1              
Q   21                                        
R   30                             1          
S   30                               1        
T   21                                        
V   63                                        
W   3                                        
Y   15                                       1

Nucleotide and amino acid mutations

Here we provide list of mutation observed in Nucleocapsid at gene and protein of COVID-19.
-The position column is nucleotide position in reference genome as NC_045512.2
-The Reference column indicate reference nucleotide in NC_045512.2
-The NS column indicate number of samples that this position have been observed
-The NSR column indicate number of samples with reference nucleotide. Therefore diffrenciate related to Ns indicate number of sample with mutated nucleotide
Contoury Position Reference Alt. NSR NS AAchange
0 Bahrain 266 A 150 150
1 Bahrain 267 T 150 150
2 Bahrain 268 G 150 150
3 Bahrain 269 G 150 150
4 Bahrain 270 A 150 150
5 Bahrain 271 G 150 150
6 Bahrain 272 A 150 150
7 Bahrain 273 G 150 150
8 Bahrain 274 C T 150 149 Ser3Ser
9 Bahrain 275 C 150 150
10 Bahrain 276 T 150 150
11 Bahrain 277 T 150 150
12 Bahrain 278 G 150 150
13 Bahrain 279 T 150 150
14 Bahrain 280 C 150 150
15 Bahrain 281 C 150 150
16 Bahrain 282 C 150 150
17 Bahrain 283 T 150 150
18 Bahrain 284 G 150 150
19 Bahrain 285 G 150 150
20 Bahrain 286 T 150 150
21 Bahrain 287 T 150 150
22 Bahrain 288 T 150 150
23 Bahrain 289 C 150 150
24 Bahrain 290 A 150 150
25 Bahrain 291 A 150 150
26 Bahrain 292 C 150 150
27 Bahrain 293 G 150 150
28 Bahrain 294 A 150 150
29 Bahrain 295 G 150 150
30 Bahrain 296 A 150 150
31 Bahrain 297 A 150 150
32 Bahrain 298 A 150 150
33 Bahrain 299 A 150 150
34 Bahrain 300 C 150 150
35 Bahrain 301 A 150 150
36 Bahrain 302 C 150 150
37 Bahrain 303 A 150 150
38 Bahrain 304 C 150 150
39 Bahrain 305 G 150 150
40 Bahrain 306 T 150 150
41 Bahrain 307 C 150 150
42 Bahrain 308 C 150 150
43 Bahrain 309 A 150 150
44 Bahrain 310 A 150 150
45 Bahrain 311 C 150 150
46 Bahrain 312 T 150 150
47 Bahrain 313 C T 150 79 Leu16Leu
48 Bahrain 314 A 150 150
49 Bahrain 315 G 150 150
50 Bahrain 316 T 150 150
51 Bahrain 317 T 150 150
52 Bahrain 318 T 150 150
53 Bahrain 319 G 150 150
54 Bahrain 320 C 150 150
55 Bahrain 321 C 150 150
56 Bahrain 322 T 150 150
57 Bahrain 323 G 150 150
58 Bahrain 324 T 150 150
59 Bahrain 325 T 150 150
60 Bahrain 326 T 150 150
61 Bahrain 327 T 150 150
62 Bahrain 328 A 150 150
63 Bahrain 329 C 150 150
64 Bahrain 330 A 150 150
65 Bahrain 331 G 150 150
66 Bahrain 332 G 150 150
67 Bahrain 333 T 150 150
68 Bahrain 334 T 150 150
69 Bahrain 335 C 150 150
70 Bahrain 336 G 150 150
71 Bahrain 337 C T 150 149 Arg24Arg
72 Bahrain 338 G 150 150
73 Bahrain 339 A 150 150
74 Bahrain 340 C 150 150
75 Bahrain 341 G 150 150
76 Bahrain 342 T 150 150
77 Bahrain 343 G 150 150
78 Bahrain 344 C 150 150
79 Bahrain 345 T 150 150
80 Bahrain 346 C 150 150
81 Bahrain 347 G 150 150
82 Bahrain 348 T 150 150
83 Bahrain 349 A 150 150
84 Bahrain 350 C 150 150
85 Bahrain 351 G 150 150
86 Bahrain 352 T 150 150
87 Bahrain 353 G 150 150
88 Bahrain 354 G 150 150
89 Bahrain 355 C 150 150
90 Bahrain 356 T 150 150
91 Bahrain 357 T 150 150
92 Bahrain 358 T 150 150
93 Bahrain 359 G 150 150
94 Bahrain 360 G 150 150
95 Bahrain 361 A 150 150
96 Bahrain 362 G 150 150
97 Bahrain 363 A 150 150
98 Bahrain 364 C 150 150
99 Bahrain 365 T 150 150
100 Bahrain 366 C 150 150
101 Bahrain 367 C 150 150
102 Bahrain 368 G 150 150
103 Bahrain 369 T 150 150
104 Bahrain 370 G 150 150
105 Bahrain 371 G 150 150
106 Bahrain 372 A 150 150
107 Bahrain 373 G 150 150
108 Bahrain 374 G 150 150
109 Bahrain 375 A 150 150
110 Bahrain 376 G T 150 125 Glu37Asp
111 Bahrain 377 G 150 150
112 Bahrain 378 T 150 150
113 Bahrain 379 C 150 150
114 Bahrain 380 T 150 150
115 Bahrain 381 T 150 150
116 Bahrain 382 A 150 150
117 Bahrain 383 T 150 150
118 Bahrain 384 C 150 150
119 Bahrain 385 A 150 150
120 Bahrain 386 G 150 150
121 Bahrain 387 A 150 150
122 Bahrain 388 G 150 150
123 Bahrain 389 G 150 150
124 Bahrain 390 C 150 150
125 Bahrain 391 A 150 150
126 Bahrain 392 C 150 150
127 Bahrain 393 G 150 150
128 Bahrain 394 T 150 150
129 Bahrain 395 C 150 150
130 Bahrain 396 A 150 150
131 Bahrain 397 A 150 150
132 Bahrain 398 C 150 150
133 Bahrain 399 A 150 150
134 Bahrain 400 T 150 150
135 Bahrain 401 C 150 150
136 Bahrain 402 T 150 150
137 Bahrain 403 T 150 150
138 Bahrain 404 A 150 150
139 Bahrain 405 A 150 150
140 Bahrain 406 A 150 150
141 Bahrain 407 G 150 150
142 Bahrain 408 A 150 150
143 Bahrain 409 T 150 150
144 Bahrain 410 G 150 150
145 Bahrain 411 G 150 150
146 Bahrain 412 C 150 150
147 Bahrain 413 A 150 150
148 Bahrain 414 C 150 150
149 Bahrain 415 T 150 150
150 Bahrain 416 T 150 150
151 Bahrain 417 G 150 150
152 Bahrain 418 T 150 150
153 Bahrain 419 G 150 150
154 Bahrain 420 G 150 150
155 Bahrain 421 C 150 150
156 Bahrain 422 T 150 150
157 Bahrain 423 T 150 150
158 Bahrain 424 A 150 150
159 Bahrain 425 G 150 150
160 Bahrain 426 T 150 148
161 Bahrain 427 A 150 148
162 Bahrain 428 G 150 148
163 Bahrain 429 A 150 148
164 Bahrain 430 A 150 148
165 Bahrain 431 G 150 148
166 Bahrain 432 T 150 148
167 Bahrain 433 T 150 148
168 Bahrain 434 G 150 148
169 Bahrain 435 A 150 148
170 Bahrain 436 A 150 148
171 Bahrain 437 A 150 148
172 Bahrain 438 A 150 148
173 Bahrain 439 A 150 148
174 Bahrain 440 G 150 148
175 Bahrain 441 G 150 148
176 Bahrain 442 C 150 148
177 Bahrain 443 G 150 148
178 Bahrain 444 T 150 148
179 Bahrain 445 T 150 148
180 Bahrain 446 T 150 148
181 Bahrain 447 T 150 148
182 Bahrain 448 G 150 148
183 Bahrain 449 C 150 148
184 Bahrain 450 C 150 148
185 Bahrain 451 T G 150 147 Pro62Pro
186 Bahrain 452 C 150 148
187 Bahrain 453 A 150 148
188 Bahrain 454 A 150 148
189 Bahrain 455 C 150 148
190 Bahrain 456 T 150 148
191 Bahrain 457 T 150 148
192 Bahrain 458 G 150 150
193 Bahrain 459 A 150 150
194 Bahrain 460 A 150 150
195 Bahrain 461 C 150 150
196 Bahrain 462 A 150 150
197 Bahrain 463 G 150 150
198 Bahrain 464 C 150 150
199 Bahrain 465 C 150 150
200 Bahrain 466 C 150 150
201 Bahrain 467 T 150 150
202 Bahrain 468 A 150 150
203 Bahrain 469 T 150 150
204 Bahrain 470 G 150 150
205 Bahrain 471 T 150 150
206 Bahrain 472 G 150 150
207 Bahrain 473 T 150 150
208 Bahrain 474 T 150 150
209 Bahrain 475 C 150 150
210 Bahrain 476 A 150 150
211 Bahrain 477 T 150 150
212 Bahrain 478 C 150 150
213 Bahrain 479 A 150 150
214 Bahrain 480 A 150 150
215 Bahrain 481 A 150 150
216 Bahrain 482 C 150 150
217 Bahrain 483 G 150 150
218 Bahrain 484 T 150 150
219 Bahrain 485 T 150 150
220 Bahrain 486 C 150 150
221 Bahrain 487 G 150 150
222 Bahrain 488 G 150 150
223 Bahrain 489 A 150 150
224 Bahrain 490 T 150 150
225 Bahrain 491 G 150 150
226 Bahrain 492 C 150 150
227 Bahrain 493 T 150 150
228 Bahrain 494 C 150 150
229 Bahrain 495 G 150 150
230 Bahrain 496 A 150 150
231 Bahrain 497 A 150 150
232 Bahrain 498 C 150 150
233 Bahrain 499 T 150 150
234 Bahrain 500 G 150 150
235 Bahrain 501 C 150 150
236 Bahrain 502 A 150 150
237 Bahrain 503 C 150 150
238 Bahrain 504 C 150 150
239 Bahrain 505 T 150 150
240 Bahrain 506 C 150 150
241 Bahrain 507 A 150 150
242 Bahrain 508 T 150 150
243 Bahrain 509 G 150 150
244 Bahrain 510 G 150 150
245 Bahrain 511 T 150 150
246 Bahrain 512 C 150 150
247 Bahrain 513 A 150 150
248 Bahrain 514 T 150 150
249 Bahrain 515 G 150 150
250 Bahrain 516 T 150 150
251 Bahrain 517 T 150 150
252 Bahrain 518 A 150 150
253 Bahrain 519 T 150 150
254 Bahrain 520 G 150 150
255 Bahrain 521 G 150 150
256 Bahrain 522 T 150 150
257 Bahrain 523 T 150 150
258 Bahrain 524 G 150 150
259 Bahrain 525 A 150 150
260 Bahrain 526 G 150 150
261 Bahrain 527 C T 150 149 Leu88Leu
262 Bahrain 528 T 150 150
263 Bahrain 529 G 150 150
264 Bahrain 530 G 150 150
265 Bahrain 531 T 150 150
266 Bahrain 532 A 150 150
267 Bahrain 533 G 150 150
268 Bahrain 534 C 150 150
269 Bahrain 535 A 150 150
270 Bahrain 536 G 150 150
271 Bahrain 537 A 150 150
272 Bahrain 538 A 150 150
273 Bahrain 539 C 150 150
274 Bahrain 540 T 150 150
275 Bahrain 541 C 150 150
276 Bahrain 542 G 150 150
277 Bahrain 543 A 150 150
278 Bahrain 544 A 150 150
279 Bahrain 545 G 150 150
280 Bahrain 546 G 150 150
281 Bahrain 547 C 150 150
282 Bahrain 548 A 150 150
283 Bahrain 549 T 150 150
284 Bahrain 550 T 150 150
285 Bahrain 551 C 150 150
286 Bahrain 552 A 150 150
287 Bahrain 553 G 150 150
288 Bahrain 554 T 150 150
289 Bahrain 555 A 150 150
290 Bahrain 556 C T 150 149 Tyr97Tyr
291 Bahrain 557 G 150 150
292 Bahrain 558 G 150 150
293 Bahrain 559 T 150 150
294 Bahrain 560 C 150 150
295 Bahrain 561 G 150 150
296 Bahrain 562 T 150 150
297 Bahrain 563 A 150 150
298 Bahrain 564 G 150 150
299 Bahrain 565 T 150 150
300 Bahrain 566 G 150 150
301 Bahrain 567 G 150 150
302 Bahrain 568 T 150 150
303 Bahrain 569 G 150 150
304 Bahrain 570 A 150 150
305 Bahrain 571 G 150 150
306 Bahrain 572 A 150 150
307 Bahrain 573 C 150 150
308 Bahrain 574 A 150 150
309 Bahrain 575 C 150 150
310 Bahrain 576 T 150 150
311 Bahrain 577 T 150 150
312 Bahrain 578 G 150 150
313 Bahrain 579 G 150 150
314 Bahrain 580 T 150 150
315 Bahrain 581 G 150 150
316 Bahrain 582 T 150 150
317 Bahrain 583 C 150 150
318 Bahrain 584 C 150 150
319 Bahrain 585 T 150 150
320 Bahrain 586 T 150 150
321 Bahrain 587 G 150 150
322 Bahrain 588 T 150 150
323 Bahrain 589 C 150 150
324 Bahrain 590 C 150 150
325 Bahrain 591 C 150 150
326 Bahrain 592 T 150 150
327 Bahrain 593 C 150 150
328 Bahrain 594 A 150 150
329 Bahrain 595 T 150 150
330 Bahrain 596 G 150 150
331 Bahrain 597 T 150 150
332 Bahrain 598 G 150 150
333 Bahrain 599 G 150 150
334 Bahrain 600 G 150 150
335 Bahrain 601 C 150 150
336 Bahrain 602 G 150 150
337 Bahrain 603 A 150 150
338 Bahrain 604 A 150 150
339 Bahrain 605 A 150 150
340 Bahrain 606 T 150 150
341 Bahrain 607 A 150 150
342 Bahrain 608 C 150 150
343 Bahrain 609 C 150 150
344 Bahrain 610 A 150 150
345 Bahrain 611 G 150 150
346 Bahrain 612 T 150 150
347 Bahrain 613 G 150 150
348 Bahrain 614 G 150 150
349 Bahrain 615 C 150 150
350 Bahrain 616 T 150 150
351 Bahrain 617 T 150 150
352 Bahrain 618 A 150 150
353 Bahrain 619 C 150 150
354 Bahrain 620 C 150 150
355 Bahrain 621 G 150 150
356 Bahrain 622 C 150 150
357 Bahrain 623 A 150 150
358 Bahrain 624 A 150 150
359 Bahrain 625 G 150 150
360 Bahrain 626 G 150 150
361 Bahrain 627 T 150 150
362 Bahrain 628 T 150 150
363 Bahrain 629 C 150 150
364 Bahrain 630 T 150 150
365 Bahrain 631 T 150 150
366 Bahrain 632 C 150 150
367 Bahrain 633 T 150 150
368 Bahrain 634 T 150 150
369 Bahrain 635 C 150 150
370 Bahrain 636 G 150 150
371 Bahrain 637 T 150 150
372 Bahrain 638 A 150 150
373 Bahrain 639 A 150 150
374 Bahrain 640 G 150 150
375 Bahrain 641 A 150 150
376 Bahrain 642 A 150 150
377 Bahrain 643 C 150 150
378 Bahrain 644 G 150 150
379 Bahrain 645 G 150 150
380 Bahrain 646 T 150 150
381 Bahrain 647 A 150 150
382 Bahrain 648 A 150 150
383 Bahrain 649 T 150 150
384 Bahrain 650 A 150 150
385 Bahrain 651 A 150 150
386 Bahrain 652 A 150 150
387 Bahrain 653 G 150 150
388 Bahrain 654 G 150 150
389 Bahrain 655 A 150 150
390 Bahrain 656 G 150 150
391 Bahrain 657 C 150 150
392 Bahrain 658 T C 150 138 Ala131Ala
393 Bahrain 659 G 150 150
394 Bahrain 660 G 150 150
395 Bahrain 661 T 150 150
396 Bahrain 662 G T 150 149 Gly133Cys
397 Bahrain 663 G 150 150
398 Bahrain 664 C T 150 126 Gly133Gly
399 Bahrain 665 C 150 150
400 Bahrain 666 A 150 150
401 Bahrain 667 T 150 150
402 Bahrain 668 A 150 150
403 Bahrain 669 G 150 150
404 Bahrain 670 T 150 150
405 Bahrain 671 T 150 150
406 Bahrain 672 A 150 150
407 Bahrain 673 C 150 150
408 Bahrain 674 G 150 149
409 Bahrain 675 G 150 150
410 Bahrain 676 C 150 150
411 Bahrain 677 G 150 150
412 Bahrain 678 C 150 150
413 Bahrain 679 C 150 150
414 Bahrain 680 G 150 150
415 Bahrain 681 A 150 150
416 Bahrain 682 T 150 150
417 Bahrain 683 C T 150 147 Leu140Leu
418 Bahrain 684 T 150 150
419 Bahrain 685 A 150 150
420 Bahrain 686 A 150 150
421 Bahrain 687 A 150 150
422 Bahrain 688 G 150 150
423 Bahrain 689 T 150 150
424 Bahrain 690 C 150 150
425 Bahrain 691 A 150 150
426 Bahrain 692 T 150 150
427 Bahrain 693 T 150 150
428 Bahrain 694 T 150 150
429 Bahrain 695 G 150 150
430 Bahrain 696 A 150 150
431 Bahrain 697 C 150 150
432 Bahrain 698 T 150 150
433 Bahrain 699 T 150 150
434 Bahrain 700 A 150 150
435 Bahrain 701 G 150 150
436 Bahrain 702 G 150 150
437 Bahrain 703 C 150 150
438 Bahrain 704 G 150 150
439 Bahrain 705 A 150 150
440 Bahrain 706 C 150 150
441 Bahrain 707 G 150 150
442 Bahrain 708 A 150 150
443 Bahrain 709 G 150 150
444 Bahrain 710 C 150 150
445 Bahrain 711 T 150 150
446 Bahrain 712 T 150 150
447 Bahrain 713 G 150 150
448 Bahrain 714 G 150 150
449 Bahrain 715 C 150 150
450 Bahrain 716 A 150 150
451 Bahrain 717 C 150 150
452 Bahrain 718 T 150 150
453 Bahrain 719 G 150 150
454 Bahrain 720 A 150 150
455 Bahrain 721 T 150 150
456 Bahrain 722 C 150 150
457 Bahrain 723 C 150 150
458 Bahrain 724 T 150 150
459 Bahrain 725 T 150 150
460 Bahrain 726 A 150 150
461 Bahrain 727 T 150 150
462 Bahrain 728 G 150 150
463 Bahrain 729 A 150 150
464 Bahrain 730 A 150 150
465 Bahrain 731 G 150 150
466 Bahrain 732 A 150 150
467 Bahrain 733 T 150 150
468 Bahrain 734 T 150 150
469 Bahrain 735 T 150 150
470 Bahrain 736 T 150 150
471 Bahrain 737 C 150 150
472 Bahrain 738 A 150 150
473 Bahrain 739 A 150 150
474 Bahrain 740 G 150 150
475 Bahrain 741 A 150 150
476 Bahrain 742 A 150 150
477 Bahrain 743 A 150 150
478 Bahrain 744 A 150 150
479 Bahrain 745 C 150 150
480 Bahrain 746 T 150 150
481 Bahrain 747 G 150 150
482 Bahrain 748 G 150 150
483 Bahrain 749 A 150 150
484 Bahrain 750 A 150 150
485 Bahrain 751 C 150 150
486 Bahrain 752 A 150 150
487 Bahrain 753 C 150 150
488 Bahrain 754 T 150 150
489 Bahrain 755 A 150 150
490 Bahrain 756 A 150 150
491 Bahrain 757 A 150 150
492 Bahrain 758 C 150 149
493 Bahrain 759 A 150 150
494 Bahrain 760 T 150 150
495 Bahrain 761 A 150 150
496 Bahrain 762 G 150 149
497 Bahrain 763 C 150 150
498 Bahrain 764 A 150 150
499 Bahrain 765 G 150 150
500 Bahrain 766 T 150 150
501 Bahrain 767 G 150 150
502 Bahrain 768 G 150 150
503 Bahrain 769 T 150 150
504 Bahrain 770 G 150 150
505 Bahrain 771 T 150 150
506 Bahrain 772 T 150 150
507 Bahrain 773 A 150 150
508 Bahrain 774 C 150 150
509 Bahrain 775 C 150 150
510 Bahrain 776 C 150 150
511 Bahrain 777 G 150 150
512 Bahrain 778 T 150 150
513 Bahrain 779 G 150 150
514 Bahrain 780 A 150 150
515 Bahrain 781 A 150 150
516 Bahrain 782 C 150 150
517 Bahrain 783 T 150 150
518 Bahrain 784 C 150 150
519 Bahrain 785 A 150 150
520 Bahrain 786 T 150 150
521 Bahrain 787 G 150 150
522 Bahrain 788 C 150 150
523 Bahrain 789 G 150 150
524 Bahrain 790 T 150 150
525 Bahrain 791 G 150 150
526 Bahrain 792 A 150 150
527 Bahrain 793 G 150 150
528 Bahrain 794 C 150 150
529 Bahrain 795 T 150 150
530 Bahrain 796 T 150 150
531 Bahrain 797 A 150 150
532 Bahrain 798 A 150 150
533 Bahrain 799 C 150 150
534 Bahrain 800 G 150 150
535 Bahrain 801 G 150 150
536 Bahrain 802 A 150 150
537 Bahrain 803 G 150 150
538 Bahrain 804 G 150 150
539 Bahrain 805 G 150 150