National Institute Of Genetic Engineering and Biotechnology

P.I:Mohammad-Ali Malboobi
Here we provide last mutation observed in Nucleocapsid gene of COVID-19 prevalent in Iran.
We kindly wait your comment or coopration in tracking crona virus project.
Amino acid changes

How to read this table:
- Rows are reference amino acids and columns are changed amino acids. E.g. Row 'A' column 'E' indicates how many 'A' amino acids have been replaced by 'E' amino acids.
- Red background colors indicate that more changes happened (heat-map).
- Diagonals are indicated using grey background color
- WARNING: This table may include different translation codon tables (e.g. mamalian DNA and mitochondrial DNA).

  * - ? A C D E F G I K L M N P R S T V Y
*     2                                  
-     228                                  
?                                        
A     12                                  
C     9                                  
D     3                                  
E     6                                  
F     15                                  
G     3                                  
I     9                                  
K     6                                  
L     43                                  
M     3                                  
N     15                                  
P     6                                  
R     9                                  
S     24                                  
T     12                                  
V     39                                  
Y     12                                  

Nucleotide and amino acid mutations

Here we provide list of mutation observed in Nucleocapsid at gene and protein of COVID-19.
-The position column is nucleotide position in reference genome as NC_045512.2
-The Reference column indicate reference nucleotide in NC_045512.2
-The NS column indicate number of samples that this position have been observed
-The NSR column indicate number of samples with reference nucleotide. Therefore diffrenciate related to Ns indicate number of sample with mutated nucleotide
Contoury Position Reference Alt. NSR NS AAchange
0 Serbia 26245 A 147 147
1 Serbia 26246 T 147 147
2 Serbia 26247 G 147 147
3 Serbia 26248 T 147 147
4 Serbia 26249 A 147 147
5 Serbia 26250 C 147 147
6 Serbia 26251 T 147 147
7 Serbia 26252 C 147 147
8 Serbia 26253 A 147 147
9 Serbia 26254 T 147 147
10 Serbia 26255 T 147 147
11 Serbia 26256 C 147 147
12 Serbia 26257 G 147 147
13 Serbia 26258 T 147 147
14 Serbia 26259 T 147 147
15 Serbia 26260 T 147 147
16 Serbia 26261 C 147 147
17 Serbia 26262 G 147 147
18 Serbia 26263 G 147 147
19 Serbia 26264 A 147 147
20 Serbia 26265 A 147 147
21 Serbia 26266 G 147 147
22 Serbia 26267 A 147 147
23 Serbia 26268 G 147 147
24 Serbia 26269 A 147 147
25 Serbia 26270 C 147 147
26 Serbia 26271 A 147 147
27 Serbia 26272 G 147 147
28 Serbia 26273 G 147 147
29 Serbia 26274 T 147 147
30 Serbia 26275 A 147 147
31 Serbia 26276 C 147 147
32 Serbia 26277 G 147 147
33 Serbia 26278 T 147 147
34 Serbia 26279 T 147 147
35 Serbia 26280 A 147 147
36 Serbia 26281 A 147 147
37 Serbia 26282 T 147 147
38 Serbia 26283 A 147 147
39 Serbia 26284 G 147 147
40 Serbia 26285 T 147 147
41 Serbia 26286 T 147 147
42 Serbia 26287 A 147 147
43 Serbia 26288 A 147 147
44 Serbia 26289 T 147 147
45 Serbia 26290 A 147 147
46 Serbia 26291 G 147 147
47 Serbia 26292 C 147 147
48 Serbia 26293 G 147 147
49 Serbia 26294 T 147 147
50 Serbia 26295 A 147 147
51 Serbia 26296 C 147 147
52 Serbia 26297 T 147 147
53 Serbia 26298 T 147 147
54 Serbia 26299 C 147 147
55 Serbia 26300 T 147 147
56 Serbia 26301 T 147 147
57 Serbia 26302 T 147 147
58 Serbia 26303 T 147 147
59 Serbia 26304 T 147 147
60 Serbia 26305 C 147 147
61 Serbia 26306 T 147 147
62 Serbia 26307 T 147 147
63 Serbia 26308 G 147 147
64 Serbia 26309 C 147 147
65 Serbia 26310 T 147 147
66 Serbia 26311 T 147 147
67 Serbia 26312 T 147 147
68 Serbia 26313 C 147 147
69 Serbia 26314 G 147 147
70 Serbia 26315 T 147 147
71 Serbia 26316 G 147 147
72 Serbia 26317 G 147 147
73 Serbia 26318 T 147 147
74 Serbia 26319 A 147 147
75 Serbia 26320 T 147 147
76 Serbia 26321 T 147 147
77 Serbia 26322 C 147 147
78 Serbia 26323 T 147 147
79 Serbia 26324 T 147 147
80 Serbia 26325 G 147 147
81 Serbia 26326 C 147 147
82 Serbia 26327 T 147 147
83 Serbia 26328 A 147 147
84 Serbia 26329 G 147 147
85 Serbia 26330 T 147 147
86 Serbia 26331 T 147 147
87 Serbia 26332 A 147 147
88 Serbia 26333 C 147 147
89 Serbia 26334 A 147 147
90 Serbia 26335 C 147 147
91 Serbia 26336 T 147 147
92 Serbia 26337 A 147 147
93 Serbia 26338 G 147 147
94 Serbia 26339 C 147 147
95 Serbia 26340 C 147 147
96 Serbia 26341 A 147 147
97 Serbia 26342 T 147 147
98 Serbia 26343 C 147 147
99 Serbia 26344 C 147 147
100 Serbia 26345 T 147 147
101 Serbia 26346 T 147 147
102 Serbia 26347 A 147 147
103 Serbia 26348 C 147 147
104 Serbia 26349 T 147 147
105 Serbia 26350 G 147 147
106 Serbia 26351 C 147 147
107 Serbia 26352 G 147 147
108 Serbia 26353 C 147 147
109 Serbia 26354 T 147 147
110 Serbia 26355 T 147 147
111 Serbia 26356 C 147 147
112 Serbia 26357 G 147 147
113 Serbia 26358 A 147 147
114 Serbia 26359 T 147 147
115 Serbia 26360 T 147 147
116 Serbia 26361 G 147 147
117 Serbia 26362 T 147 147
118 Serbia 26363 G 147 147
119 Serbia 26364 T 147 147
120 Serbia 26365 G 147 147
121 Serbia 26366 C 147 147
122 Serbia 26367 G 147 147
123 Serbia 26368 T 147 147
124 Serbia 26369 A 147 147
125 Serbia 26370 C 147 147
126 Serbia 26371 T 147 147
127 Serbia 26372 G 147 147
128 Serbia 26373 C 147 147
129 Serbia 26374 T 147 147
130 Serbia 26375 G 147 147
131 Serbia 26376 C 147 147
132 Serbia 26377 A 147 147
133 Serbia 26378 A 147 147
134 Serbia 26379 T 147 147
135 Serbia 26380 A 147 147
136 Serbia 26381 T 147 147
137 Serbia 26382 T 147 147
138 Serbia 26383 G 147 147
139 Serbia 26384 T 147 147
140 Serbia 26385 T 147 147
141 Serbia 26386 A 147 147
142 Serbia 26387 A 147 147
143 Serbia 26388 C 147 147
144 Serbia 26389 G 147 147
145 Serbia 26390 T 147 147
146 Serbia 26391 G 147 147
147 Serbia 26392 A 147 147
148 Serbia 26393 G 147 147
149 Serbia 26394 T 147 147
150 Serbia 26395 C 147 147
151 Serbia 26396 T 147 147
152 Serbia 26397 T 147 147
153 Serbia 26398 G 147 147
154 Serbia 26399 T 147 147
155 Serbia 26400 A 147 147
156 Serbia 26401 A 147 147
157 Serbia 26402 A 147 147
158 Serbia 26403 A 147 147
159 Serbia 26404 C 147 147
160 Serbia 26405 C 147 147
161 Serbia 26406 T 147 147
162 Serbia 26407 T 147 147
163 Serbia 26408 C 147 147
164 Serbia 26409 T 147 147
165 Serbia 26410 T 147 147
166 Serbia 26411 T 147 147
167 Serbia 26412 T 147 147
168 Serbia 26413 T 147 147
169 Serbia 26414 A 147 147
170 Serbia 26415 C 147 147
171 Serbia 26416 G 147 147
172 Serbia 26417 T 147 147
173 Serbia 26418 T 147 147
174 Serbia 26419 T 147 147
175 Serbia 26420 A 147 147
176 Serbia 26421 C 147 147
177 Serbia 26422 T 147 147
178 Serbia 26423 C 147 147
179 Serbia 26424 T 147 147
180 Serbia 26425 C 147 147
181 Serbia 26426 G 147 147
182 Serbia 26427 T 147 147
183 Serbia 26428 G 147 147
184 Serbia 26429 T 147 147
185 Serbia 26430 T 147 147
186 Serbia 26431 A 147 147
187 Serbia 26432 A 147 147
188 Serbia 26433 A 147 147
189 Serbia 26434 A 147 147
190 Serbia 26435 A 147 147
191 Serbia 26436 T 147 147
192 Serbia 26437 C 147 147
193 Serbia 26438 T 147 147
194 Serbia 26439 G 147 147
195 Serbia 26440 A 147 147
196 Serbia 26441 A 147 147
197 Serbia 26442 T 147 147
198 Serbia 26443 T 147 147
199 Serbia 26444 C 147 147
200 Serbia 26445 T 147 147
201 Serbia 26446 T 147 147
202 Serbia 26447 C 147 147
203 Serbia 26448 T 147 147
204 Serbia 26449 A 147 147
205 Serbia 26450 G 147 147
206 Serbia 26451 A 147 147
207 Serbia 26452 G 147 147
208 Serbia 26453 T 147 147
209 Serbia 26454 T 147 147
210 Serbia 26455 C 147 147
211 Serbia 26456 C 147 147
212 Serbia 26457 T 147 147
213 Serbia 26458 G 147 147
214 Serbia 26459 A 147 147
215 Serbia 26460 T 147 147
216 Serbia 26461 C 147 147
217 Serbia 26462 T 147 147
218 Serbia 26463 T 147 147
219 Serbia 26464 C 147 147
220 Serbia 26465 T 147 147
221 Serbia 26466 G 147 147
222 Serbia 26467 G 147 147
223 Serbia 26468 T 147 147
224 Serbia 26469 C 147 147
225 Serbia 26470 T 147 147
226 Serbia 26471 A 147 147
227 Serbia 26472 A 147 147