National Institute Of Genetic Engineering and Biotechnology

P.I:Mohammad-Ali Malboobi
Here we provide last mutation observed in Nucleocapsid gene of COVID-19 prevalent in Iran.
We kindly wait your comment or coopration in tracking crona virus project.

Amino acid changes

How to read this table:
- Rows are reference amino acids and columns are changed amino acids. E.g. Row 'A' column 'E' indicates how many 'A' amino acids have been replaced by 'E' amino acids.
- Red background colors indicate that more changes happened (heat-map).
- Diagonals are indicated using grey background color
- WARNING: This table may include different translation codon tables (e.g. mamalian DNA and mitochondrial DNA).

  * - ? A C D E F G I K L M N P R S T V Y
*     2                                  
-     228                                  
?                                        
A     12                                  
C     9                                  
D     3                                  
E     6                                  
F     15                                  
G     3                                  
I     9                                  
K     6                                  
L     43                                  
M     3                                  
N     15                                  
P     6                                  
R     9                                  
S     24                                  
T     12                                  
V     39                                  
Y     12                                  

Nucleotide and amino acid mutations

Here we provide list of mutation observed in Nucleocapsid at gene and protein of COVID-19.
-The position column is nucleotide position in reference genome as NC_045512.2
-The Reference column indicate reference nucleotide in NC_045512.2
-The NS column indicate number of samples that this position have been observed
-The NSR column indicate number of samples with reference nucleotide. Therefore diffrenciate related to Ns indicate number of sample with mutated nucleotide

Contoury Position Reference Alt. NSR NS AAchange
0 Republic_of_Congo 26245 A 11 11
1 Republic_of_Congo 26246 T 11 11
2 Republic_of_Congo 26247 G 11 11
3 Republic_of_Congo 26248 T 11 11
4 Republic_of_Congo 26249 A 11 11
5 Republic_of_Congo 26250 C 11 11
6 Republic_of_Congo 26251 T 11 11
7 Republic_of_Congo 26252 C 11 11
8 Republic_of_Congo 26253 A 11 11
9 Republic_of_Congo 26254 T 11 11
10 Republic_of_Congo 26255 T 11 11
11 Republic_of_Congo 26256 C 11 11
12 Republic_of_Congo 26257 G 11 11
13 Republic_of_Congo 26258 T 11 11
14 Republic_of_Congo 26259 T 11 11
15 Republic_of_Congo 26260 T 11 11
16 Republic_of_Congo 26261 C 11 11
17 Republic_of_Congo 26262 G 11 11
18 Republic_of_Congo 26263 G 11 11
19 Republic_of_Congo 26264 A 11 11
20 Republic_of_Congo 26265 A 11 11
21 Republic_of_Congo 26266 G 11 11
22 Republic_of_Congo 26267 A 11 11
23 Republic_of_Congo 26268 G 11 11
24 Republic_of_Congo 26269 A 11 11
25 Republic_of_Congo 26270 C 11 11
26 Republic_of_Congo 26271 A 11 11
27 Republic_of_Congo 26272 G 11 11
28 Republic_of_Congo 26273 G 11 11
29 Republic_of_Congo 26274 T 11 11
30 Republic_of_Congo 26275 A 11 11
31 Republic_of_Congo 26276 C 11 11
32 Republic_of_Congo 26277 G 11 11
33 Republic_of_Congo 26278 T 11 11
34 Republic_of_Congo 26279 T 11 11
35 Republic_of_Congo 26280 A 11 11
36 Republic_of_Congo 26281 A 11 11
37 Republic_of_Congo 26282 T 11 11
38 Republic_of_Congo 26283 A 11 11
39 Republic_of_Congo 26284 G 11 11
40 Republic_of_Congo 26285 T 11 11
41 Republic_of_Congo 26286 T 11 11
42 Republic_of_Congo 26287 A 11 11
43 Republic_of_Congo 26288 A 11 11
44 Republic_of_Congo 26289 T 11 11
45 Republic_of_Congo 26290 A 11 11
46 Republic_of_Congo 26291 G 11 11
47 Republic_of_Congo 26292 C 11 11
48 Republic_of_Congo 26293 G 11 11
49 Republic_of_Congo 26294 T 11 11
50 Republic_of_Congo 26295 A 11 11
51 Republic_of_Congo 26296 C 11 11
52 Republic_of_Congo 26297 T 11 11
53 Republic_of_Congo 26298 T 11 11
54 Republic_of_Congo 26299 C 11 11
55 Republic_of_Congo 26300 T 11 11
56 Republic_of_Congo 26301 T 11 11
57 Republic_of_Congo 26302 T 11 11
58 Republic_of_Congo 26303 T 11 11
59 Republic_of_Congo 26304 T 11 11
60 Republic_of_Congo 26305 C 11 11
61 Republic_of_Congo 26306 T 11 11
62 Republic_of_Congo 26307 T 11 11
63 Republic_of_Congo 26308 G 11 11
64 Republic_of_Congo 26309 C 11 11
65 Republic_of_Congo 26310 T 11 11
66 Republic_of_Congo 26311 T 11 11
67 Republic_of_Congo 26312 T 11 11
68 Republic_of_Congo 26313 C 11 11
69 Republic_of_Congo 26314 G 11 11
70 Republic_of_Congo 26315 T 11 11
71 Republic_of_Congo 26316 G 11 11
72 Republic_of_Congo 26317 G 11 11
73 Republic_of_Congo 26318 T 11 11
74 Republic_of_Congo 26319 A 11 11
75 Republic_of_Congo 26320 T 11 11
76 Republic_of_Congo 26321 T 11 11
77 Republic_of_Congo 26322 C 11 11
78 Republic_of_Congo 26323 T 11 11
79 Republic_of_Congo 26324 T 11 11
80 Republic_of_Congo 26325 G 11 11
81 Republic_of_Congo 26326 C 11 11
82 Republic_of_Congo 26327 T 11 11
83 Republic_of_Congo 26328 A 11 11
84 Republic_of_Congo 26329 G 11 11
85 Republic_of_Congo 26330 T 11 11
86 Republic_of_Congo 26331 T 11 11
87 Republic_of_Congo 26332 A 11 11
88 Republic_of_Congo 26333 C 11 11
89 Republic_of_Congo 26334 A 11 11
90 Republic_of_Congo 26335 C 11 11
91 Republic_of_Congo 26336 T 11 11
92 Republic_of_Congo 26337 A 11 11
93 Republic_of_Congo 26338 G 11 11
94 Republic_of_Congo 26339 C 11 11
95 Republic_of_Congo 26340 C 11 11
96 Republic_of_Congo 26341 A 11 11
97 Republic_of_Congo 26342 T 11 11
98 Republic_of_Congo 26343 C 11 11
99 Republic_of_Congo 26344 C 11 11
100 Republic_of_Congo 26345 T 11 11
101 Republic_of_Congo 26346 T 11 11
102 Republic_of_Congo 26347 A 11 11
103 Republic_of_Congo 26348 C 11 11
104 Republic_of_Congo 26349 T 11 11
105 Republic_of_Congo 26350 G 11 11
106 Republic_of_Congo 26351 C 11 11
107 Republic_of_Congo 26352 G 11 11
108 Republic_of_Congo 26353 C 11 11
109 Republic_of_Congo 26354 T 11 11
110 Republic_of_Congo 26355 T 11 11
111 Republic_of_Congo 26356 C 11 11
112 Republic_of_Congo 26357 G 11 11
113 Republic_of_Congo 26358 A 11 11
114 Republic_of_Congo 26359 T 11 11
115 Republic_of_Congo 26360 T 11 11
116 Republic_of_Congo 26361 G 11 11
117 Republic_of_Congo 26362 T 11 11
118 Republic_of_Congo 26363 G 11 11
119 Republic_of_Congo 26364 T 11 11
120 Republic_of_Congo 26365 G 11 11
121 Republic_of_Congo 26366 C 11 11
122 Republic_of_Congo 26367 G 11 11
123 Republic_of_Congo 26368 T 11 11
124 Republic_of_Congo 26369 A 11 11
125 Republic_of_Congo 26370 C 11 11
126 Republic_of_Congo 26371 T 11 11
127 Republic_of_Congo 26372 G 11 11
128 Republic_of_Congo 26373 C 11 11
129 Republic_of_Congo 26374 T 11 11
130 Republic_of_Congo 26375 G 11 11
131 Republic_of_Congo 26376 C 11 11
132 Republic_of_Congo 26377 A 11 11
133 Republic_of_Congo 26378 A 11 11
134 Republic_of_Congo 26379 T 11 11
135 Republic_of_Congo 26380 A 11 11
136 Republic_of_Congo 26381 T 11 11
137 Republic_of_Congo 26382 T 11 11
138 Republic_of_Congo 26383 G 11 11
139 Republic_of_Congo 26384 T 11 11
140 Republic_of_Congo 26385 T 11 11
141 Republic_of_Congo 26386 A 11 11
142 Republic_of_Congo 26387 A 11 11
143 Republic_of_Congo 26388 C 11 11
144 Republic_of_Congo 26389 G 11 11
145 Republic_of_Congo 26390 T 11 11
146 Republic_of_Congo 26391 G 11 11
147 Republic_of_Congo 26392 A 11 11
148 Republic_of_Congo 26393 G 11 11
149 Republic_of_Congo 26394 T 11 11
150 Republic_of_Congo 26395 C 11 11
151 Republic_of_Congo 26396 T 11 11
152 Republic_of_Congo 26397 T 11 11
153 Republic_of_Congo 26398 G 11 11
154 Republic_of_Congo 26399 T 11 11
155 Republic_of_Congo 26400 A 11 11
156 Republic_of_Congo 26401 A 11 11
157 Republic_of_Congo 26402 A 11 11
158 Republic_of_Congo 26403 A 11 11
159 Republic_of_Congo 26404 C 11 11
160 Republic_of_Congo 26405 C 11 11
161 Republic_of_Congo 26406 T 11 11
162 Republic_of_Congo 26407 T 11 11
163 Republic_of_Congo 26408 C 11 11
164 Republic_of_Congo 26409 T 11 11
165 Republic_of_Congo 26410 T 11 11
166 Republic_of_Congo 26411 T 11 11
167 Republic_of_Congo 26412 T 11 11
168 Republic_of_Congo 26413 T 11 11
169 Republic_of_Congo 26414 A 11 11
170 Republic_of_Congo 26415 C 11 11
171 Republic_of_Congo 26416 G 11 11
172 Republic_of_Congo 26417 T 11 11
173 Republic_of_Congo 26418 T 11 11
174 Republic_of_Congo 26419 T 11 11
175 Republic_of_Congo 26420 A 11 11
176 Republic_of_Congo 26421 C 11 11
177 Republic_of_Congo 26422 T 11 11
178 Republic_of_Congo 26423 C 11 11
179 Republic_of_Congo 26424 T 11 11
180 Republic_of_Congo 26425 C 11 11
181 Republic_of_Congo 26426 G 11 11
182 Republic_of_Congo 26427 T 11 11
183 Republic_of_Congo 26428 G 11 11
184 Republic_of_Congo 26429 T 11 11
185 Republic_of_Congo 26430 T 11 11
186 Republic_of_Congo 26431 A 11 11
187 Republic_of_Congo 26432 A 11 11
188 Republic_of_Congo 26433 A 11 11
189 Republic_of_Congo 26434 A 11 11
190 Republic_of_Congo 26435 A 11 11
191 Republic_of_Congo 26436 T 11 11
192 Republic_of_Congo 26437 C 11 11
193 Republic_of_Congo 26438 T 11 11
194 Republic_of_Congo 26439 G 11 11
195 Republic_of_Congo 26440 A 11 11
196 Republic_of_Congo 26441 A 11 11
197 Republic_of_Congo 26442 T 11 11
198 Republic_of_Congo 26443 T 11 11
199 Republic_of_Congo 26444 C 11 11
200 Republic_of_Congo 26445 T 11 11
201 Republic_of_Congo 26446 T 11 11
202 Republic_of_Congo 26447 C 11 11
203 Republic_of_Congo 26448 T 11 11
204 Republic_of_Congo 26449 A 11 11
205 Republic_of_Congo 26450 G 11 11
206 Republic_of_Congo 26451 A 11 11
207 Republic_of_Congo 26452 G 11 11
208 Republic_of_Congo 26453 T 11 11
209 Republic_of_Congo 26454 T 11 11
210 Republic_of_Congo 26455 C 11 11
211 Republic_of_Congo 26456 C 11 11
212 Republic_of_Congo 26457 T 11 11
213 Republic_of_Congo 26458 G 11 11
214 Republic_of_Congo 26459 A 11 11
215 Republic_of_Congo 26460 T 11 11
216 Republic_of_Congo 26461 C 11 11
217 Republic_of_Congo 26462 T 11 11
218 Republic_of_Congo 26463 T 11 11
219 Republic_of_Congo 26464 C 11 11
220 Republic_of_Congo 26465 T 11 11
221 Republic_of_Congo 26466 G 11 11
222 Republic_of_Congo 26467 G 11 11
223 Republic_of_Congo 26468 T 11 11
224 Republic_of_Congo 26469 C 11 11
225 Republic_of_Congo 26470 T 11 11
226 Republic_of_Congo 26471 A 11 11
227 Republic_of_Congo 26472 A 11 11