National Institute Of Genetic Engineering and Biotechnology

P.I:Mohammad-Ali Malboobi
Here we provide last mutation observed in Nucleocapsid gene of COVID-19 prevalent in Iran.
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Amino acid changes

How to read this table:
- Rows are reference amino acids and columns are changed amino acids. E.g. Row 'A' column 'E' indicates how many 'A' amino acids have been replaced by 'E' amino acids.
- Red background colors indicate that more changes happened (heat-map).
- Diagonals are indicated using grey background color
- WARNING: This table may include different translation codon tables (e.g. mamalian DNA and mitochondrial DNA).

  * - ? A C D E F G I K L M N P R S T V Y
*     2                                  
-     228                                  
?                                        
A     12                                  
C     9                                  
D     3                                  
E     6                                  
F     15                                  
G     3                                  
I     9                                  
K     6                                  
L     43                                  
M     3                                  
N     15                           1      
P     6                                  
R     9                                  
S     24                                  
T     12                                  
V     39                                  
Y     12                                  

Nucleotide and amino acid mutations

Here we provide list of mutation observed in Nucleocapsid at gene and protein of COVID-19.
-The position column is nucleotide position in reference genome as NC_045512.2
-The Reference column indicate reference nucleotide in NC_045512.2
-The NS column indicate number of samples that this position have been observed
-The NSR column indicate number of samples with reference nucleotide. Therefore diffrenciate related to Ns indicate number of sample with mutated nucleotide
Contoury Position Reference Alt. NSR NS AAchange
0 North_Macedonia 26245 A 82 82
1 North_Macedonia 26246 T 82 82
2 North_Macedonia 26247 G 82 82
3 North_Macedonia 26248 T 82 82
4 North_Macedonia 26249 A 82 82
5 North_Macedonia 26250 C 82 82
6 North_Macedonia 26251 T 82 82
7 North_Macedonia 26252 C 82 82
8 North_Macedonia 26253 A 82 82
9 North_Macedonia 26254 T 82 82
10 North_Macedonia 26255 T 82 82
11 North_Macedonia 26256 C 82 82
12 North_Macedonia 26257 G 82 82
13 North_Macedonia 26258 T 82 82
14 North_Macedonia 26259 T 82 82
15 North_Macedonia 26260 T 82 82
16 North_Macedonia 26261 C 82 82
17 North_Macedonia 26262 G 82 82
18 North_Macedonia 26263 G 82 82
19 North_Macedonia 26264 A 82 82
20 North_Macedonia 26265 A 82 82
21 North_Macedonia 26266 G 82 82
22 North_Macedonia 26267 A 82 82
23 North_Macedonia 26268 G 82 82
24 North_Macedonia 26269 A 82 82
25 North_Macedonia 26270 C 82 82
26 North_Macedonia 26271 A 82 82
27 North_Macedonia 26272 G 82 82
28 North_Macedonia 26273 G 82 82
29 North_Macedonia 26274 T 82 82
30 North_Macedonia 26275 A 82 82
31 North_Macedonia 26276 C 82 82
32 North_Macedonia 26277 G 82 82
33 North_Macedonia 26278 T 82 82
34 North_Macedonia 26279 T 82 82
35 North_Macedonia 26280 A 82 82
36 North_Macedonia 26281 A 82 82
37 North_Macedonia 26282 T 82 82
38 North_Macedonia 26283 A 82 82
39 North_Macedonia 26284 G 82 82
40 North_Macedonia 26285 T 82 82
41 North_Macedonia 26286 T 82 82
42 North_Macedonia 26287 A 82 82
43 North_Macedonia 26288 A 82 82
44 North_Macedonia 26289 T 82 82
45 North_Macedonia 26290 A 82 82
46 North_Macedonia 26291 G 82 82
47 North_Macedonia 26292 C 82 82
48 North_Macedonia 26293 G 82 82
49 North_Macedonia 26294 T 82 82
50 North_Macedonia 26295 A 82 82
51 North_Macedonia 26296 C 82 82
52 North_Macedonia 26297 T 82 82
53 North_Macedonia 26298 T 82 82
54 North_Macedonia 26299 C 82 82
55 North_Macedonia 26300 T 82 82
56 North_Macedonia 26301 T 82 82
57 North_Macedonia 26302 T 82 82
58 North_Macedonia 26303 T 82 82
59 North_Macedonia 26304 T 82 82
60 North_Macedonia 26305 C 82 82
61 North_Macedonia 26306 T 82 82
62 North_Macedonia 26307 T 82 82
63 North_Macedonia 26308 G 82 82
64 North_Macedonia 26309 C 82 82
65 North_Macedonia 26310 T 82 82
66 North_Macedonia 26311 T 82 82
67 North_Macedonia 26312 T 82 82
68 North_Macedonia 26313 C 82 82
69 North_Macedonia 26314 G 82 82
70 North_Macedonia 26315 T 82 82
71 North_Macedonia 26316 G 82 82
72 North_Macedonia 26317 G 82 82
73 North_Macedonia 26318 T 82 82
74 North_Macedonia 26319 A 82 82
75 North_Macedonia 26320 T 82 82
76 North_Macedonia 26321 T 82 82
77 North_Macedonia 26322 C 82 82
78 North_Macedonia 26323 T 82 82
79 North_Macedonia 26324 T 82 82
80 North_Macedonia 26325 G 82 82
81 North_Macedonia 26326 C 82 82
82 North_Macedonia 26327 T 82 82
83 North_Macedonia 26328 A 82 82
84 North_Macedonia 26329 G 82 82
85 North_Macedonia 26330 T 82 82
86 North_Macedonia 26331 T 82 82
87 North_Macedonia 26332 A 82 82
88 North_Macedonia 26333 C 82 82
89 North_Macedonia 26334 A 82 82
90 North_Macedonia 26335 C 82 82
91 North_Macedonia 26336 T 82 82
92 North_Macedonia 26337 A 82 82
93 North_Macedonia 26338 G 82 82
94 North_Macedonia 26339 C 82 82
95 North_Macedonia 26340 C 82 82
96 North_Macedonia 26341 A 82 82
97 North_Macedonia 26342 T 82 82
98 North_Macedonia 26343 C 82 82
99 North_Macedonia 26344 C 82 82
100 North_Macedonia 26345 T 82 82
101 North_Macedonia 26346 T 82 82
102 North_Macedonia 26347 A 82 82
103 North_Macedonia 26348 C 82 82
104 North_Macedonia 26349 T 82 82
105 North_Macedonia 26350 G 82 82
106 North_Macedonia 26351 C 82 82
107 North_Macedonia 26352 G 82 82
108 North_Macedonia 26353 C 82 82
109 North_Macedonia 26354 T 82 82
110 North_Macedonia 26355 T 82 82
111 North_Macedonia 26356 C 82 82
112 North_Macedonia 26357 G 82 82
113 North_Macedonia 26358 A 82 82
114 North_Macedonia 26359 T 82 82
115 North_Macedonia 26360 T 82 82
116 North_Macedonia 26361 G 82 82
117 North_Macedonia 26362 T 82 82
118 North_Macedonia 26363 G 82 82
119 North_Macedonia 26364 T 82 82
120 North_Macedonia 26365 G 82 82
121 North_Macedonia 26366 C 82 82
122 North_Macedonia 26367 G 82 82
123 North_Macedonia 26368 T 82 82
124 North_Macedonia 26369 A 82 82
125 North_Macedonia 26370 C 82 82
126 North_Macedonia 26371 T 82 82
127 North_Macedonia 26372 G 82 82
128 North_Macedonia 26373 C 82 82
129 North_Macedonia 26374 T 82 82
130 North_Macedonia 26375 G 82 82
131 North_Macedonia 26376 C 82 82
132 North_Macedonia 26377 A 82 82
133 North_Macedonia 26378 A 82 82
134 North_Macedonia 26379 T 82 82
135 North_Macedonia 26380 A 82 82
136 North_Macedonia 26381 T 82 82
137 North_Macedonia 26382 T 82 82
138 North_Macedonia 26383 G 82 82
139 North_Macedonia 26384 T 82 82
140 North_Macedonia 26385 T 82 82
141 North_Macedonia 26386 A 82 82
142 North_Macedonia 26387 A 82 82
143 North_Macedonia 26388 C 82 82
144 North_Macedonia 26389 G 82 82
145 North_Macedonia 26390 T 82 82
146 North_Macedonia 26391 G 82 82
147 North_Macedonia 26392 A 82 82
148 North_Macedonia 26393 G 82 82
149 North_Macedonia 26394 T 82 82
150 North_Macedonia 26395 C 82 82
151 North_Macedonia 26396 T 82 82
152 North_Macedonia 26397 T 82 82
153 North_Macedonia 26398 G 82 82
154 North_Macedonia 26399 T 82 82
155 North_Macedonia 26400 A 82 82
156 North_Macedonia 26401 A 82 82
157 North_Macedonia 26402 A 82 82
158 North_Macedonia 26403 A 82 82
159 North_Macedonia 26404 C 82 82
160 North_Macedonia 26405 C 82 82
161 North_Macedonia 26406 T 82 82
162 North_Macedonia 26407 T 82 82
163 North_Macedonia 26408 C 82 82
164 North_Macedonia 26409 T 82 82
165 North_Macedonia 26410 T 82 82
166 North_Macedonia 26411 T 82 82
167 North_Macedonia 26412 T 82 82
168 North_Macedonia 26413 T 82 82
169 North_Macedonia 26414 A 82 82
170 North_Macedonia 26415 C 82 82
171 North_Macedonia 26416 G 82 82
172 North_Macedonia 26417 T 82 82
173 North_Macedonia 26418 T 82 82
174 North_Macedonia 26419 T 82 82
175 North_Macedonia 26420 A 82 82
176 North_Macedonia 26421 C 82 82
177 North_Macedonia 26422 T 82 82
178 North_Macedonia 26423 C 82 82
179 North_Macedonia 26424 T 82 82
180 North_Macedonia 26425 C 82 82
181 North_Macedonia 26426 G 82 82
182 North_Macedonia 26427 T 82 82
183 North_Macedonia 26428 G 82 82
184 North_Macedonia 26429 T 82 82
185 North_Macedonia 26430 T 82 82
186 North_Macedonia 26431 A 82 82
187 North_Macedonia 26432 A 82 82
188 North_Macedonia 26433 A 82 82
189 North_Macedonia 26434 A 82 82
190 North_Macedonia 26435 A G 82 81 Asn64Ser
191 North_Macedonia 26436 T 82 82
192 North_Macedonia 26437 C 82 82
193 North_Macedonia 26438 T 82 82
194 North_Macedonia 26439 G 82 82
195 North_Macedonia 26440 A 82 82
196 North_Macedonia 26441 A 82 82
197 North_Macedonia 26442 T 82 82
198 North_Macedonia 26443 T 82 82
199 North_Macedonia 26444 C 82 82
200 North_Macedonia 26445 T 82 82
201 North_Macedonia 26446 T 82 82
202 North_Macedonia 26447 C 82 82
203 North_Macedonia 26448 T 82 82
204 North_Macedonia 26449 A 82 82
205 North_Macedonia 26450 G 82 82
206 North_Macedonia 26451 A 82 82
207 North_Macedonia 26452 G 82 82
208 North_Macedonia 26453 T 82 82
209 North_Macedonia 26454 T 82 82
210 North_Macedonia 26455 C 82 82
211 North_Macedonia 26456 C 82 82
212 North_Macedonia 26457 T 82 82
213 North_Macedonia 26458 G 82 82
214 North_Macedonia 26459 A 82 82
215 North_Macedonia 26460 T 82 82
216 North_Macedonia 26461 C 82 82
217 North_Macedonia 26462 T 82 82
218 North_Macedonia 26463 T 82 82
219 North_Macedonia 26464 C 82 82
220 North_Macedonia 26465 T 82 82
221 North_Macedonia 26466 G 82 82
222 North_Macedonia 26467 G 82 82
223 North_Macedonia 26468 T 82 82
224 North_Macedonia 26469 C 82 82
225 North_Macedonia 26470 T 82 82
226 North_Macedonia 26471 A 82 82
227 North_Macedonia 26472 A 82 82