National Institute Of Genetic Engineering and Biotechnology

P.I:Mohammad-Ali Malboobi
Here we provide last mutation observed in Nucleocapsid gene of COVID-19 prevalent in Iran.
We kindly wait your comment or coopration in tracking crona virus project.
Amino acid changes

How to read this table:
- Rows are reference amino acids and columns are changed amino acids. E.g. Row 'A' column 'E' indicates how many 'A' amino acids have been replaced by 'E' amino acids.
- Red background colors indicate that more changes happened (heat-map).
- Diagonals are indicated using grey background color
- WARNING: This table may include different translation codon tables (e.g. mamalian DNA and mitochondrial DNA).

  * - ? A C D E F G I K L M N P R S T V Y
*     2                                  
-     228                                  
?                                        
A     12                                  
C     9                                  
D     3                                  
E     6                                  
F     15                                  
G     3                                  
I     9                                  
K     6                                  
L     43                 1                
M     3                                  
N     15                                  
P     6                                  
R     9                                  
S     24                                  
T     12                                  
V     39                                  
Y     12                                  

Nucleotide and amino acid mutations

Here we provide list of mutation observed in Nucleocapsid at gene and protein of COVID-19.
-The position column is nucleotide position in reference genome as NC_045512.2
-The Reference column indicate reference nucleotide in NC_045512.2
-The NS column indicate number of samples that this position have been observed
-The NSR column indicate number of samples with reference nucleotide. Therefore diffrenciate related to Ns indicate number of sample with mutated nucleotide
Contoury Position Reference Alt. NSR NS AAchange
0 Equatorial_Guinea 26245 A 95 95
1 Equatorial_Guinea 26246 T 95 95
2 Equatorial_Guinea 26247 G 95 95
3 Equatorial_Guinea 26248 T 95 95
4 Equatorial_Guinea 26249 A 95 95
5 Equatorial_Guinea 26250 C 95 95
6 Equatorial_Guinea 26251 T 95 95
7 Equatorial_Guinea 26252 C 95 95
8 Equatorial_Guinea 26253 A 95 95
9 Equatorial_Guinea 26254 T 95 95
10 Equatorial_Guinea 26255 T 95 95
11 Equatorial_Guinea 26256 C 95 95
12 Equatorial_Guinea 26257 G 95 95
13 Equatorial_Guinea 26258 T 95 95
14 Equatorial_Guinea 26259 T 95 95
15 Equatorial_Guinea 26260 T 95 95
16 Equatorial_Guinea 26261 C 95 95
17 Equatorial_Guinea 26262 G 95 95
18 Equatorial_Guinea 26263 G 95 95
19 Equatorial_Guinea 26264 A 95 95
20 Equatorial_Guinea 26265 A 95 95
21 Equatorial_Guinea 26266 G 95 95
22 Equatorial_Guinea 26267 A 95 95
23 Equatorial_Guinea 26268 G 95 95
24 Equatorial_Guinea 26269 A 95 95
25 Equatorial_Guinea 26270 C 95 95
26 Equatorial_Guinea 26271 A 95 95
27 Equatorial_Guinea 26272 G 95 95
28 Equatorial_Guinea 26273 G 95 95
29 Equatorial_Guinea 26274 T 95 95
30 Equatorial_Guinea 26275 A 95 95
31 Equatorial_Guinea 26276 C 95 95
32 Equatorial_Guinea 26277 G 95 95
33 Equatorial_Guinea 26278 T 95 95
34 Equatorial_Guinea 26279 T 95 95
35 Equatorial_Guinea 26280 A 95 95
36 Equatorial_Guinea 26281 A 95 95
37 Equatorial_Guinea 26282 T 95 95
38 Equatorial_Guinea 26283 A 95 95
39 Equatorial_Guinea 26284 G 95 95
40 Equatorial_Guinea 26285 T 95 95
41 Equatorial_Guinea 26286 T 95 95
42 Equatorial_Guinea 26287 A 95 95
43 Equatorial_Guinea 26288 A 95 95
44 Equatorial_Guinea 26289 T 95 95
45 Equatorial_Guinea 26290 A 95 95
46 Equatorial_Guinea 26291 G 95 95
47 Equatorial_Guinea 26292 C 94 94
48 Equatorial_Guinea 26293 G 94 94
49 Equatorial_Guinea 26294 T 94 94
50 Equatorial_Guinea 26295 A 94 94
51 Equatorial_Guinea 26296 C 94 94
52 Equatorial_Guinea 26297 T 94 94
53 Equatorial_Guinea 26298 T 94 94
54 Equatorial_Guinea 26299 C 94 94
55 Equatorial_Guinea 26300 T 94 94
56 Equatorial_Guinea 26301 T 94 94
57 Equatorial_Guinea 26302 T 94 94
58 Equatorial_Guinea 26303 T 94 94
59 Equatorial_Guinea 26304 T 94 94
60 Equatorial_Guinea 26305 C 94 94
61 Equatorial_Guinea 26306 T 94 94
62 Equatorial_Guinea 26307 T 94 94
63 Equatorial_Guinea 26308 G 94 94
64 Equatorial_Guinea 26309 C 94 94
65 Equatorial_Guinea 26310 T 94 94
66 Equatorial_Guinea 26311 T 94 94
67 Equatorial_Guinea 26312 T 94 94
68 Equatorial_Guinea 26313 C 94 94
69 Equatorial_Guinea 26314 G 94 94
70 Equatorial_Guinea 26315 T 94 94
71 Equatorial_Guinea 26316 G 94 94
72 Equatorial_Guinea 26317 G 94 94
73 Equatorial_Guinea 26318 T 94 94
74 Equatorial_Guinea 26319 A 94 94
75 Equatorial_Guinea 26320 T 94 94
76 Equatorial_Guinea 26321 T 94 94
77 Equatorial_Guinea 26322 C 94 94
78 Equatorial_Guinea 26323 T 94 94
79 Equatorial_Guinea 26324 T 94 94
80 Equatorial_Guinea 26325 G 94 94
81 Equatorial_Guinea 26326 C T 94 93 Leu28Leu
82 Equatorial_Guinea 26327 T 94 94
83 Equatorial_Guinea 26328 A 94 94
84 Equatorial_Guinea 26329 G 94 94
85 Equatorial_Guinea 26330 T 94 94
86 Equatorial_Guinea 26331 T 94 94
87 Equatorial_Guinea 26332 A 94 94
88 Equatorial_Guinea 26333 C 94 94
89 Equatorial_Guinea 26334 A 94 94
90 Equatorial_Guinea 26335 C 94 94
91 Equatorial_Guinea 26336 T 94 94
92 Equatorial_Guinea 26337 A 94 94
93 Equatorial_Guinea 26338 G 94 94
94 Equatorial_Guinea 26339 C 94 94
95 Equatorial_Guinea 26340 C 94 94
96 Equatorial_Guinea 26341 A 94 94
97 Equatorial_Guinea 26342 T 94 94
98 Equatorial_Guinea 26343 C 94 94
99 Equatorial_Guinea 26344 C 94 94
100 Equatorial_Guinea 26345 T 94 94
101 Equatorial_Guinea 26346 T 94 94
102 Equatorial_Guinea 26347 A 94 94
103 Equatorial_Guinea 26348 C 94 94
104 Equatorial_Guinea 26349 T 94 94
105 Equatorial_Guinea 26350 G 94 94
106 Equatorial_Guinea 26351 C 94 94
107 Equatorial_Guinea 26352 G 94 94
108 Equatorial_Guinea 26353 C 94 94
109 Equatorial_Guinea 26354 T 94 94
110 Equatorial_Guinea 26355 T 94 94
111 Equatorial_Guinea 26356 C 94 94
112 Equatorial_Guinea 26357 G 94 94
113 Equatorial_Guinea 26358 A 94 94
114 Equatorial_Guinea 26359 T 94 94
115 Equatorial_Guinea 26360 T 94 94
116 Equatorial_Guinea 26361 G 94 94
117 Equatorial_Guinea 26362 T 94 94
118 Equatorial_Guinea 26363 G 94 94
119 Equatorial_Guinea 26364 T 94 94
120 Equatorial_Guinea 26365 G 94 94
121 Equatorial_Guinea 26366 C 94 94
122 Equatorial_Guinea 26367 G 94 94
123 Equatorial_Guinea 26368 T 94 94
124 Equatorial_Guinea 26369 A 94 94
125 Equatorial_Guinea 26370 C 94 94
126 Equatorial_Guinea 26371 T 94 94
127 Equatorial_Guinea 26372 G 94 94
128 Equatorial_Guinea 26373 C 94 94
129 Equatorial_Guinea 26374 T 94 94
130 Equatorial_Guinea 26375 G 94 94
131 Equatorial_Guinea 26376 C 94 94
132 Equatorial_Guinea 26377 A 94 94
133 Equatorial_Guinea 26378 A 94 94
134 Equatorial_Guinea 26379 T 94 94
135 Equatorial_Guinea 26380 A 94 94
136 Equatorial_Guinea 26381 T 94 94
137 Equatorial_Guinea 26382 T 94 94
138 Equatorial_Guinea 26383 G 94 94
139 Equatorial_Guinea 26384 T 94 94
140 Equatorial_Guinea 26385 T 94 94
141 Equatorial_Guinea 26386 A 94 94
142 Equatorial_Guinea 26387 A 94 94
143 Equatorial_Guinea 26388 C 94 94
144 Equatorial_Guinea 26389 G 94 94
145 Equatorial_Guinea 26390 T 94 94
146 Equatorial_Guinea 26391 G 94 94
147 Equatorial_Guinea 26392 A 94 94
148 Equatorial_Guinea 26393 G 94 94
149 Equatorial_Guinea 26394 T 94 94
150 Equatorial_Guinea 26395 C 94 94
151 Equatorial_Guinea 26396 T 94 94
152 Equatorial_Guinea 26397 T 94 94
153 Equatorial_Guinea 26398 G 94 94
154 Equatorial_Guinea 26399 T 94 94
155 Equatorial_Guinea 26400 A 94 94
156 Equatorial_Guinea 26401 A 94 94
157 Equatorial_Guinea 26402 A 94 94
158 Equatorial_Guinea 26403 A 94 94
159 Equatorial_Guinea 26404 C 94 94
160 Equatorial_Guinea 26405 C 94 94
161 Equatorial_Guinea 26406 T 94 94
162 Equatorial_Guinea 26407 T 94 94
163 Equatorial_Guinea 26408 C 94 94
164 Equatorial_Guinea 26409 T 94 94
165 Equatorial_Guinea 26410 T 94 94
166 Equatorial_Guinea 26411 T 94 94
167 Equatorial_Guinea 26412 T 94 94
168 Equatorial_Guinea 26413 T 94 94
169 Equatorial_Guinea 26414 A 94 94
170 Equatorial_Guinea 26415 C 94 94
171 Equatorial_Guinea 26416 G 94 94
172 Equatorial_Guinea 26417 T 94 94
173 Equatorial_Guinea 26418 T 94 94
174 Equatorial_Guinea 26419 T 94 94
175 Equatorial_Guinea 26420 A 94 94
176 Equatorial_Guinea 26421 C 94 94
177 Equatorial_Guinea 26422 T 94 94
178 Equatorial_Guinea 26423 C 94 94
179 Equatorial_Guinea 26424 T 94 94
180 Equatorial_Guinea 26425 C 94 94
181 Equatorial_Guinea 26426 G 94 94
182 Equatorial_Guinea 26427 T 94 94
183 Equatorial_Guinea 26428 G 94 94
184 Equatorial_Guinea 26429 T 94 94
185 Equatorial_Guinea 26430 T 94 94
186 Equatorial_Guinea 26431 A 94 94
187 Equatorial_Guinea 26432 A 94 94
188 Equatorial_Guinea 26433 A 94 94
189 Equatorial_Guinea 26434 A 94 94
190 Equatorial_Guinea 26435 A 94 94
191 Equatorial_Guinea 26436 T 94 94
192 Equatorial_Guinea 26437 C 94 94
193 Equatorial_Guinea 26438 T 94 94
194 Equatorial_Guinea 26439 G 94 94
195 Equatorial_Guinea 26440 A 94 94
196 Equatorial_Guinea 26441 A 94 94
197 Equatorial_Guinea 26442 T 94 94
198 Equatorial_Guinea 26443 T 94 94
199 Equatorial_Guinea 26444 C 94 94
200 Equatorial_Guinea 26445 T 94 94
201 Equatorial_Guinea 26446 T 94 94
202 Equatorial_Guinea 26447 C 94 94
203 Equatorial_Guinea 26448 T 94 94
204 Equatorial_Guinea 26449 A 94 94
205 Equatorial_Guinea 26450 G 94 94
206 Equatorial_Guinea 26451 A 94 94
207 Equatorial_Guinea 26452 G 94 94
208 Equatorial_Guinea 26453 T 94 94
209 Equatorial_Guinea 26454 T 94 94
210 Equatorial_Guinea 26455 C 94 94
211 Equatorial_Guinea 26456 C 94 94
212 Equatorial_Guinea 26457 T 94 94
213 Equatorial_Guinea 26458 G 94 94
214 Equatorial_Guinea 26459 A 94 94
215 Equatorial_Guinea 26460 T 94 94
216 Equatorial_Guinea 26461 C 94 94
217 Equatorial_Guinea 26462 T 94 94
218 Equatorial_Guinea 26463 T 94 94
219 Equatorial_Guinea 26464 C 94 94
220 Equatorial_Guinea 26465 T 94 94
221 Equatorial_Guinea 26466 G 94 94
222 Equatorial_Guinea 26467 G 94 94
223 Equatorial_Guinea 26468 T 94 94
224 Equatorial_Guinea 26469 C 94 94
225 Equatorial_Guinea 26470 T 94 94
226 Equatorial_Guinea 26471 A 94 94
227 Equatorial_Guinea 26472 A 94 94