National Institute Of Genetic Engineering and Biotechnology

P.I:Mohammad-Ali Malboobi
Here we provide last mutation observed in Nucleocapsid gene of COVID-19 prevalent in Iran.
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Amino acid changes

How to read this table:
- Rows are reference amino acids and columns are changed amino acids. E.g. Row 'A' column 'E' indicates how many 'A' amino acids have been replaced by 'E' amino acids.
- Red background colors indicate that more changes happened (heat-map).
- Diagonals are indicated using grey background color
- WARNING: This table may include different translation codon tables (e.g. mamalian DNA and mitochondrial DNA).

  * - ? A D E F H I K L M N P Q R S T V W Y
*     2                                    
-     186                                    
?                                          
A     3                                    
D     12                                    
E     16                                    
F     9                                    
H     3                                    
I     30                                    
K     12                                    
L     24                                    
M     9                                    
N     12                                    
P     3                                    
Q     9                                    
R     3                                    
S     12                                    
T     9                                    
V     9                                    
W     3                                    
Y     6                                    

Nucleotide and amino acid mutations

Here we provide list of mutation observed in Nucleocapsid at gene and protein of COVID-19.
-The position column is nucleotide position in reference genome as NC_045512.2
-The Reference column indicate reference nucleotide in NC_045512.2
-The NS column indicate number of samples that this position have been observed
-The NSR column indicate number of samples with reference nucleotide. Therefore diffrenciate related to Ns indicate number of sample with mutated nucleotide
Contoury Position Reference Alt. NSR NS AAchange
0 Equatorial_Guinea 27202 A 95 95
1 Equatorial_Guinea 27203 T 95 95
2 Equatorial_Guinea 27204 G 95 95
3 Equatorial_Guinea 27205 T 95 95
4 Equatorial_Guinea 27206 T 95 95
5 Equatorial_Guinea 27207 T 95 95
6 Equatorial_Guinea 27208 C 95 95
7 Equatorial_Guinea 27209 A 95 95
8 Equatorial_Guinea 27210 T 95 95
9 Equatorial_Guinea 27211 C 95 95
10 Equatorial_Guinea 27212 T 95 95
11 Equatorial_Guinea 27213 C 95 95
12 Equatorial_Guinea 27214 G 95 95
13 Equatorial_Guinea 27215 T 95 95
14 Equatorial_Guinea 27216 T 95 95
15 Equatorial_Guinea 27217 G 95 95
16 Equatorial_Guinea 27218 A 95 95
17 Equatorial_Guinea 27219 C 95 95
18 Equatorial_Guinea 27220 T 95 95
19 Equatorial_Guinea 27221 T 95 95
20 Equatorial_Guinea 27222 T 95 95
21 Equatorial_Guinea 27223 C 95 95
22 Equatorial_Guinea 27224 A 95 95
23 Equatorial_Guinea 27225 G 95 95
24 Equatorial_Guinea 27226 G 95 95
25 Equatorial_Guinea 27227 T 95 95
26 Equatorial_Guinea 27228 T 95 95
27 Equatorial_Guinea 27229 A 95 95
28 Equatorial_Guinea 27230 C 95 95
29 Equatorial_Guinea 27231 T 95 95
30 Equatorial_Guinea 27232 A 95 95
31 Equatorial_Guinea 27233 T 95 95
32 Equatorial_Guinea 27234 A 95 95
33 Equatorial_Guinea 27235 G 95 95
34 Equatorial_Guinea 27236 C 95 95
35 Equatorial_Guinea 27237 A 95 95
36 Equatorial_Guinea 27238 G 95 95
37 Equatorial_Guinea 27239 A 95 95
38 Equatorial_Guinea 27240 G 95 95
39 Equatorial_Guinea 27241 A 95 95
40 Equatorial_Guinea 27242 T 95 95
41 Equatorial_Guinea 27243 A 95 95
42 Equatorial_Guinea 27244 T 95 95
43 Equatorial_Guinea 27245 T 95 95
44 Equatorial_Guinea 27246 A 95 95
45 Equatorial_Guinea 27247 C 95 95
46 Equatorial_Guinea 27248 T 95 95
47 Equatorial_Guinea 27249 A 95 95
48 Equatorial_Guinea 27250 A 95 95
49 Equatorial_Guinea 27251 T 95 95
50 Equatorial_Guinea 27252 T 95 95
51 Equatorial_Guinea 27253 A 95 95
52 Equatorial_Guinea 27254 T 95 95
53 Equatorial_Guinea 27255 T 95 95
54 Equatorial_Guinea 27256 A 95 95
55 Equatorial_Guinea 27257 T 95 95
56 Equatorial_Guinea 27258 G 95 95
57 Equatorial_Guinea 27259 A 95 95
58 Equatorial_Guinea 27260 G 95 95
59 Equatorial_Guinea 27261 G 95 95
60 Equatorial_Guinea 27262 A 95 95
61 Equatorial_Guinea 27263 C 95 95
62 Equatorial_Guinea 27264 T 95 95
63 Equatorial_Guinea 27265 T 95 95
64 Equatorial_Guinea 27266 T 95 95
65 Equatorial_Guinea 27267 T 95 95
66 Equatorial_Guinea 27268 A 95 95
67 Equatorial_Guinea 27269 A 95 95
68 Equatorial_Guinea 27270 A 95 95
69 Equatorial_Guinea 27271 G 95 95
70 Equatorial_Guinea 27272 T 95 95
71 Equatorial_Guinea 27273 T 95 95
72 Equatorial_Guinea 27274 T 95 95
73 Equatorial_Guinea 27275 C 95 95
74 Equatorial_Guinea 27276 C 95 95
75 Equatorial_Guinea 27277 A 95 95
76 Equatorial_Guinea 27278 T 95 95
77 Equatorial_Guinea 27279 T 95 95
78 Equatorial_Guinea 27280 T 95 95
79 Equatorial_Guinea 27281 G 95 95
80 Equatorial_Guinea 27282 G 95 95
81 Equatorial_Guinea 27283 A 95 95
82 Equatorial_Guinea 27284 A 95 95
83 Equatorial_Guinea 27285 T 95 95
84 Equatorial_Guinea 27286 C 95 95
85 Equatorial_Guinea 27287 T 95 95
86 Equatorial_Guinea 27288 T 95 95
87 Equatorial_Guinea 27289 G 95 95
88 Equatorial_Guinea 27290 A 95 95
89 Equatorial_Guinea 27291 T 95 95
90 Equatorial_Guinea 27292 T 95 95
91 Equatorial_Guinea 27293 A 95 95
92 Equatorial_Guinea 27294 C 95 95
93 Equatorial_Guinea 27295 A 95 95
94 Equatorial_Guinea 27296 T 95 95
95 Equatorial_Guinea 27297 C 95 95
96 Equatorial_Guinea 27298 A 95 95
97 Equatorial_Guinea 27299 T 95 95
98 Equatorial_Guinea 27300 A 95 95
99 Equatorial_Guinea 27301 A 95 95
100 Equatorial_Guinea 27302 A 95 95
101 Equatorial_Guinea 27303 C 95 95
102 Equatorial_Guinea 27304 C 95 95
103 Equatorial_Guinea 27305 T 95 95
104 Equatorial_Guinea 27306 C 95 95
105 Equatorial_Guinea 27307 A 95 95
106 Equatorial_Guinea 27308 T 95 95
107 Equatorial_Guinea 27309 A 95 95
108 Equatorial_Guinea 27310 A 95 95
109 Equatorial_Guinea 27311 T 95 95
110 Equatorial_Guinea 27312 T 95 95
111 Equatorial_Guinea 27313 A 95 95
112 Equatorial_Guinea 27314 A 95 95
113 Equatorial_Guinea 27315 A 95 95
114 Equatorial_Guinea 27316 A 95 95
115 Equatorial_Guinea 27317 A 95 95
116 Equatorial_Guinea 27318 T 95 95
117 Equatorial_Guinea 27319 T 95 95
118 Equatorial_Guinea 27320 T 95 95
119 Equatorial_Guinea 27321 A 95 95
120 Equatorial_Guinea 27322 T 95 95
121 Equatorial_Guinea 27323 C 95 95
122 Equatorial_Guinea 27324 T 95 95
123 Equatorial_Guinea 27325 A 95 95
124 Equatorial_Guinea 27326 A 95 95
125 Equatorial_Guinea 27327 G 95 95
126 Equatorial_Guinea 27328 T 95 95
127 Equatorial_Guinea 27329 C 95 95
128 Equatorial_Guinea 27330 A 95 95
129 Equatorial_Guinea 27331 C 95 95
130 Equatorial_Guinea 27332 T 95 95
131 Equatorial_Guinea 27333 A 95 95
132 Equatorial_Guinea 27334 A 95 95
133 Equatorial_Guinea 27335 C 95 95
134 Equatorial_Guinea 27336 T 95 95
135 Equatorial_Guinea 27337 G 95 95
136 Equatorial_Guinea 27338 A 95 95
137 Equatorial_Guinea 27339 G 95 95
138 Equatorial_Guinea 27340 A 95 95
139 Equatorial_Guinea 27341 A 95 95
140 Equatorial_Guinea 27342 T 95 95
141 Equatorial_Guinea 27343 A 95 95
142 Equatorial_Guinea 27344 A 95 95
143 Equatorial_Guinea 27345 A 95 95
144 Equatorial_Guinea 27346 T 95 95
145 Equatorial_Guinea 27347 A 95 95
146 Equatorial_Guinea 27348 T 95 95
147 Equatorial_Guinea 27349 T 95 95
148 Equatorial_Guinea 27350 C 95 95
149 Equatorial_Guinea 27351 T 95 95
150 Equatorial_Guinea 27352 C 95 95
151 Equatorial_Guinea 27353 A 95 95
152 Equatorial_Guinea 27354 A 95 95
153 Equatorial_Guinea 27355 T 95 95
154 Equatorial_Guinea 27356 T 95 95
155 Equatorial_Guinea 27357 A 95 95
156 Equatorial_Guinea 27358 G 95 95
157 Equatorial_Guinea 27359 A 95 95
158 Equatorial_Guinea 27360 T 95 95
159 Equatorial_Guinea 27361 G 95 95
160 Equatorial_Guinea 27362 A 95 95
161 Equatorial_Guinea 27363 A 95 95
162 Equatorial_Guinea 27364 G 95 95
163 Equatorial_Guinea 27365 A 95 95
164 Equatorial_Guinea 27366 G 95 95
165 Equatorial_Guinea 27367 C 95 95
166 Equatorial_Guinea 27368 A 95 95
167 Equatorial_Guinea 27369 A 95 95
168 Equatorial_Guinea 27370 C 95 95
169 Equatorial_Guinea 27371 C 95 95
170 Equatorial_Guinea 27372 A 95 95
171 Equatorial_Guinea 27373 A 95 95
172 Equatorial_Guinea 27374 T 95 95
173 Equatorial_Guinea 27375 G 95 95
174 Equatorial_Guinea 27376 G 95 95
175 Equatorial_Guinea 27377 A 95 95
176 Equatorial_Guinea 27378 G 95 95
177 Equatorial_Guinea 27379 A 95 95
178 Equatorial_Guinea 27380 T 95 95
179 Equatorial_Guinea 27381 T 95 95
180 Equatorial_Guinea 27382 G 95 95
181 Equatorial_Guinea 27383 A 95 95
182 Equatorial_Guinea 27384 T 95 95
183 Equatorial_Guinea 27385 T 95 95
184 Equatorial_Guinea 27386 A 95 95
185 Equatorial_Guinea 27387 A 95 95