National Institute Of Genetic Engineering and Biotechnology

P.I:Mohammad-Ali Malboobi
Here we provide last mutation observed in Nucleocapsid gene of COVID-19 prevalent in Iran.
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Amino acid changes

How to read this table:
- Rows are reference amino acids and columns are changed amino acids. E.g. Row 'A' column 'E' indicates how many 'A' amino acids have been replaced by 'E' amino acids.
- Red background colors indicate that more changes happened (heat-map).
- Diagonals are indicated using grey background color
- WARNING: This table may include different translation codon tables (e.g. mamalian DNA and mitochondrial DNA).

  * - ? A D E F H I K L M N P Q R S T V W Y
*     2                                    
-     186                                    
?                                          
A     3                                    
D     12                                    
E     16                                    
F     9                                    
H     3                                    
I     30                                    
K     12                                    
L     24                                    
M     9                                    
N     12                                    
P     3                                    
Q     9                                    
R     3                                    
S     12                                    
T     9                                    
V     9                                    
W     3                                    
Y     6                                    

Nucleotide and amino acid mutations

Here we provide list of mutation observed in Nucleocapsid at gene and protein of COVID-19.
-The position column is nucleotide position in reference genome as NC_045512.2
-The Reference column indicate reference nucleotide in NC_045512.2
-The NS column indicate number of samples that this position have been observed
-The NSR column indicate number of samples with reference nucleotide. Therefore diffrenciate related to Ns indicate number of sample with mutated nucleotide

Contoury Position Reference Alt. NSR NS AAchange
0 Armenia 27202 A 3 3
1 Armenia 27203 T 3 3
2 Armenia 27204 G 3 3
3 Armenia 27205 T 3 3
4 Armenia 27206 T 3 3
5 Armenia 27207 T 3 3
6 Armenia 27208 C 3 3
7 Armenia 27209 A 3 3
8 Armenia 27210 T 3 3
9 Armenia 27211 C 3 3
10 Armenia 27212 T 3 3
11 Armenia 27213 C 3 3
12 Armenia 27214 G 3 3
13 Armenia 27215 T 3 3
14 Armenia 27216 T 3 3
15 Armenia 27217 G 3 3
16 Armenia 27218 A 3 3
17 Armenia 27219 C 3 3
18 Armenia 27220 T 3 3
19 Armenia 27221 T 3 3
20 Armenia 27222 T 3 3
21 Armenia 27223 C 3 3
22 Armenia 27224 A 3 3
23 Armenia 27225 G 3 3
24 Armenia 27226 G 3 3
25 Armenia 27227 T 3 3
26 Armenia 27228 T 3 3
27 Armenia 27229 A 3 3
28 Armenia 27230 C 3 3
29 Armenia 27231 T 3 3
30 Armenia 27232 A 3 3
31 Armenia 27233 T 3 3
32 Armenia 27234 A 3 3
33 Armenia 27235 G 3 3
34 Armenia 27236 C 3 3
35 Armenia 27237 A 3 3
36 Armenia 27238 G 3 3
37 Armenia 27239 A 3 3
38 Armenia 27240 G 3 3
39 Armenia 27241 A 3 3
40 Armenia 27242 T 3 3
41 Armenia 27243 A 3 3
42 Armenia 27244 T 3 3
43 Armenia 27245 T 3 3
44 Armenia 27246 A 3 3
45 Armenia 27247 C 3 3
46 Armenia 27248 T 3 3
47 Armenia 27249 A 3 3
48 Armenia 27250 A 3 3
49 Armenia 27251 T 3 3
50 Armenia 27252 T 3 3
51 Armenia 27253 A 3 3
52 Armenia 27254 T 3 3
53 Armenia 27255 T 3 3
54 Armenia 27256 A 3 3
55 Armenia 27257 T 3 3
56 Armenia 27258 G 3 3
57 Armenia 27259 A 3 3
58 Armenia 27260 G 3 3
59 Armenia 27261 G 3 3
60 Armenia 27262 A 3 3
61 Armenia 27263 C 3 3
62 Armenia 27264 T 3 3
63 Armenia 27265 T 3 3
64 Armenia 27266 T 3 3
65 Armenia 27267 T 3 3
66 Armenia 27268 A 3 3
67 Armenia 27269 A 3 3
68 Armenia 27270 A 3 3
69 Armenia 27271 G 3 3
70 Armenia 27272 T 3 3
71 Armenia 27273 T 3 3
72 Armenia 27274 T 3 3
73 Armenia 27275 C 3 3
74 Armenia 27276 C 3 3
75 Armenia 27277 A 3 3
76 Armenia 27278 T 3 3
77 Armenia 27279 T 3 3
78 Armenia 27280 T 3 3
79 Armenia 27281 G 3 3
80 Armenia 27282 G 3 3
81 Armenia 27283 A 3 3
82 Armenia 27284 A 3 3
83 Armenia 27285 T 3 3
84 Armenia 27286 C 3 3
85 Armenia 27287 T 3 3
86 Armenia 27288 T 3 3
87 Armenia 27289 G 3 3
88 Armenia 27290 A 3 3
89 Armenia 27291 T 3 3
90 Armenia 27292 T 3 3
91 Armenia 27293 A 3 3
92 Armenia 27294 C 3 3
93 Armenia 27295 A 3 3
94 Armenia 27296 T 3 3
95 Armenia 27297 C 3 3
96 Armenia 27298 A 3 3
97 Armenia 27299 T 3 3
98 Armenia 27300 A 3 3
99 Armenia 27301 A 3 3
100 Armenia 27302 A 3 3
101 Armenia 27303 C 3 3
102 Armenia 27304 C 3 3
103 Armenia 27305 T 3 3
104 Armenia 27306 C 3 3
105 Armenia 27307 A 3 3
106 Armenia 27308 T 3 3
107 Armenia 27309 A 3 3
108 Armenia 27310 A 3 3
109 Armenia 27311 T 3 3
110 Armenia 27312 T 3 3
111 Armenia 27313 A 3 3
112 Armenia 27314 A 3 3
113 Armenia 27315 A 3 3
114 Armenia 27316 A 3 3
115 Armenia 27317 A 3 3
116 Armenia 27318 T 3 3
117 Armenia 27319 T 3 3
118 Armenia 27320 T 3 3
119 Armenia 27321 A 3 3
120 Armenia 27322 T 3 3
121 Armenia 27323 C 3 3
122 Armenia 27324 T 3 3
123 Armenia 27325 A 3 3
124 Armenia 27326 A 3 3
125 Armenia 27327 G 3 3
126 Armenia 27328 T 3 3
127 Armenia 27329 C 3 3
128 Armenia 27330 A 3 3
129 Armenia 27331 C 3 3
130 Armenia 27332 T 3 3
131 Armenia 27333 A 3 3
132 Armenia 27334 A 3 3
133 Armenia 27335 C 3 3
134 Armenia 27336 T 3 3
135 Armenia 27337 G 3 3
136 Armenia 27338 A 3 3
137 Armenia 27339 G 3 3
138 Armenia 27340 A 3 3
139 Armenia 27341 A 3 3
140 Armenia 27342 T 3 3
141 Armenia 27343 A 3 3
142 Armenia 27344 A 3 3
143 Armenia 27345 A 3 3
144 Armenia 27346 T 3 3
145 Armenia 27347 A 3 3
146 Armenia 27348 T 3 3
147 Armenia 27349 T 3 3
148 Armenia 27350 C 3 3
149 Armenia 27351 T 3 3
150 Armenia 27352 C 3 3
151 Armenia 27353 A 3 3
152 Armenia 27354 A 3 3
153 Armenia 27355 T 3 3
154 Armenia 27356 T 3 3
155 Armenia 27357 A 3 3
156 Armenia 27358 G 3 3
157 Armenia 27359 A 3 3
158 Armenia 27360 T 3 3
159 Armenia 27361 G 3 3
160 Armenia 27362 A 3 3
161 Armenia 27363 A 3 3
162 Armenia 27364 G 3 3
163 Armenia 27365 A 3 3
164 Armenia 27366 G 3 3
165 Armenia 27367 C 3 3
166 Armenia 27368 A 3 3
167 Armenia 27369 A 3 3
168 Armenia 27370 C 3 3
169 Armenia 27371 C 3 3
170 Armenia 27372 A 3 3
171 Armenia 27373 A 3 3
172 Armenia 27374 T 3 3
173 Armenia 27375 G 3 3
174 Armenia 27376 G 3 3
175 Armenia 27377 A 3 3
176 Armenia 27378 G 3 3
177 Armenia 27379 A 3 3
178 Armenia 27380 T 3 3
179 Armenia 27381 T 3 3
180 Armenia 27382 G 3 3
181 Armenia 27383 A 3 3
182 Armenia 27384 T 3 3
183 Armenia 27385 T 3 3
184 Armenia 27386 A 3 3
185 Armenia 27387 A 3 3